Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05544 | Sorghum | cytosol | 39.53 | 93.46 |
| TraesCS6D01G288300.1 | Wheat | cytosol | 37.94 | 90.14 |
| Os02t0742200-01 | Rice | cytosol | 37.94 | 89.72 |
| TraesCS6A01G309000.2 | Wheat | cytosol | 37.75 | 89.67 |
| HORVU6Hr1G076210.5 | Barley | cytosol | 37.94 | 89.3 |
| KRH54429 | Soybean | cytosol | 11.26 | 87.69 |
| Solyc03g114070.2.1 | Tomato | cytosol | 36.36 | 87.62 |
| PGSC0003DMT400063229 | Potato | cytosol | 36.17 | 87.14 |
| TraesCS6B01G338000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 36.56 | 86.85 |
| Bra035878.1-P | Field mustard | cytosol | 34.19 | 84.39 |
| VIT_17s0000g07890.t01 | Wine grape | cytosol | 34.78 | 83.81 |
| GSMUA_Achr3P06090_001 | Banana | cytosol, mitochondrion, plastid | 35.38 | 83.64 |
| AT5G62880.1 | Thale cress | cytosol | 35.38 | 83.26 |
| KRH57035 | Soybean | cytosol | 34.19 | 82.78 |
| Zm00001d015036_P005 | Maize | cytosol | 32.21 | 82.74 |
| AT3G48040.1 | Thale cress | cytosol | 33.99 | 82.69 |
| Bra010128.1-P | Field mustard | cytosol | 33.99 | 82.69 |
| CDY30738 | Canola | cytosol | 34.98 | 82.33 |
| Bra029240.1-P | Field mustard | cytosol | 34.98 | 82.33 |
| CDY56740 | Canola | cytosol | 34.98 | 81.94 |
| CDY00332 | Canola | cytosol | 34.78 | 81.86 |
| CDY45748 | Canola | cytosol | 34.19 | 81.22 |
| Zm00001d018573_P002 | Maize | mitochondrion | 31.62 | 81.22 |
| PGSC0003DMT400063227 | Potato | cytosol | 25.49 | 80.62 |
| KRH63489 | Soybean | cytosol | 33.4 | 79.72 |
| CDY68200 | Canola | cytosol | 28.26 | 79.01 |
| GSMUA_Achr2P00650_001 | Banana | cytosol | 33.2 | 78.87 |
| Zm00001d052273_P004 | Maize | plastid | 33.0 | 76.96 |
| KRH54430 | Soybean | cytosol | 21.54 | 74.66 |
| Zm00001d010732_P002 | Maize | plasma membrane | 31.23 | 74.53 |
| Zm00001d038688_P002 | Maize | cytosol | 31.42 | 73.27 |
| KRH03338 | Soybean | cytosol, plastid | 34.19 | 68.11 |
| Zm00001d053899_P001 | Maize | cytosol | 30.83 | 67.24 |
| Zm00001d037911_P008 | Maize | cytosol | 30.04 | 64.96 |
| Zm00001d044802_P001 | Maize | cytosol | 36.36 | 64.11 |
Protein Annotations
| MapMan:27.4.1 | EntrezGene:541773 | UniProt:A0A1D6HJY5 | ProteinID:AQK74777.1 | InterPro:Anticodon-binding_dom | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | InterPro:IPR003578 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PFAM:PF09793 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 | PANTHER:PTHR24072:SF174 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00995 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 | TMHMM:TMhelix | UniParc:UPI00084543FD | EnsemblPlantsGene:Zm00001d018004 |
| EnsemblPlants:Zm00001d018004_P002 | EnsemblPlants:Zm00001d018004_T002 | SEG:seg | : | : | : |
Description
Rho-related protein from plants 1 Rho-related protein from plants 1
Coordinates
chr5:-:211768723..211777331
Molecular Weight (calculated)
55542.1 Da
IEP (calculated)
8.972
GRAVY (calculated)
-0.174
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSASRFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VDGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLV SRASYENIMK
101: KVLKCAILLF TFLNFVLTVH GLEFSRGLNV YPLLFTLQWI PELQHYAPGV PVVLAGTKLD LREDKHYLMD HPGLVPVTTA QGEELRRQIG AMYYIECSSK
201: TQQNVKAVFD AAIKVVIQPP TKIREKKKKK SRKGCSMIPG CGAGRLVNWA ILSRDDQPRA VSPPDQQQAA DSPVSRTPSN PPPPPRRRSS LSSQPPPIEP
301: LAPAPGGGME AGGEEFAIGV VLSAKTTLGE EFEGQIVAFD RPSNLLVIHI LPKSLMLVTR ISISQEGVGR AESGERRNVR VLKANYIREF SVLSKGDDPL
401: DPAGCMLDLN SIYAREDAAL RQAEIEAEKI GVGVTPEAQN IFDALSKTLP VQWDKTDIVV MKEVRVRSPY LPENVSGGTA AANERVKKVI DFERKRLHSR
501: APGQFS
101: KVLKCAILLF TFLNFVLTVH GLEFSRGLNV YPLLFTLQWI PELQHYAPGV PVVLAGTKLD LREDKHYLMD HPGLVPVTTA QGEELRRQIG AMYYIECSSK
201: TQQNVKAVFD AAIKVVIQPP TKIREKKKKK SRKGCSMIPG CGAGRLVNWA ILSRDDQPRA VSPPDQQQAA DSPVSRTPSN PPPPPRRRSS LSSQPPPIEP
301: LAPAPGGGME AGGEEFAIGV VLSAKTTLGE EFEGQIVAFD RPSNLLVIHI LPKSLMLVTR ISISQEGVGR AESGERRNVR VLKANYIREF SVLSKGDDPL
401: DPAGCMLDLN SIYAREDAAL RQAEIEAEKI GVGVTPEAQN IFDALSKTLP VQWDKTDIVV MKEVRVRSPY LPENVSGGTA AANERVKKVI DFERKRLHSR
501: APGQFS
001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSVNVV VEGITVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLI SRASYENVFK
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN
Arabidopsis Description
ARAC8ROP10 [Source:UniProtKB/TrEMBL;Acc:A0A178VHB5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.