Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G309000.2 | Wheat | cytosol | 99.53 | 99.53 |
| TraesCS6B01G338000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 96.71 | 96.71 |
| Os02t0742200-01 | Rice | cytosol | 95.31 | 94.86 |
| HORVU6Hr1G076210.5 | Barley | cytosol | 95.31 | 94.42 |
| EES05544 | Sorghum | cytosol | 93.9 | 93.46 |
| Solyc03g114070.2.1 | Tomato | cytosol | 88.26 | 89.52 |
| PGSC0003DMT400063229 | Potato | cytosol | 87.79 | 89.05 |
| VIT_17s0000g07890.t01 | Wine grape | cytosol | 85.45 | 86.67 |
| KRH54429 | Soybean | cytosol | 26.29 | 86.15 |
| TraesCS7D01G192400.1 | Wheat | cytosol | 85.92 | 85.92 |
| KRH57035 | Soybean | cytosol | 84.04 | 85.65 |
| GSMUA_Achr3P06090_001 | Banana | cytosol, mitochondrion, plastid | 85.92 | 85.51 |
| Bra035878.1-P | Field mustard | cytosol | 81.69 | 84.88 |
| AT3G48040.1 | Thale cress | cytosol | 81.69 | 83.65 |
| AT5G62880.1 | Thale cress | cytosol | 84.04 | 83.26 |
| Bra010128.1-P | Field mustard | cytosol | 81.22 | 83.17 |
| CDY30738 | Canola | cytosol | 83.1 | 82.33 |
| Bra029240.1-P | Field mustard | cytosol | 83.1 | 82.33 |
| GSMUA_Achr2P00650_001 | Banana | cytosol | 82.16 | 82.16 |
| CDY56740 | Canola | cytosol | 83.1 | 81.94 |
| CDY00332 | Canola | cytosol | 82.63 | 81.86 |
| CDY45748 | Canola | cytosol | 81.22 | 81.22 |
| TraesCS6D01G068500.2 | Wheat | cytosol | 75.12 | 81.22 |
| KRH63489 | Soybean | cytosol | 80.75 | 81.13 |
| TraesCS1D01G325200.1 | Wheat | cytosol | 73.71 | 79.7 |
| PGSC0003DMT400063227 | Potato | cytosol | 59.62 | 79.38 |
| CDY68200 | Canola | cytosol | 67.14 | 79.01 |
| Zm00001d052273_P004 | Maize | plastid | 79.34 | 77.88 |
| KRH54430 | Soybean | cytosol | 53.05 | 77.4 |
| TraesCS1D01G336200.1 | Wheat | cytosol | 73.24 | 73.58 |
| KRH03338 | Soybean | cytosol, plastid | 84.04 | 70.47 |
| TraesCS3D01G161900.1 | Wheat | cytosol | 69.95 | 68.35 |
| Zm00001d018004_P002 | Maize | cytosol, peroxisome, plastid | 90.14 | 37.94 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR003578 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 | PANTHER:PTHR24072:SF174 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS6D01G288300 | EnsemblPlants:TraesCS6D01G288300.1 | TIGR:cd04133 | SEG:seg |
Description
No Description!
Coordinates
chr6D:+:398178681..398181339
Molecular Weight (calculated)
23803.0 Da
IEP (calculated)
9.754
GRAVY (calculated)
-0.227
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSASRFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV ADGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLV SRASYENIMK
101: KWIPELQHYA PGVPVVLVGT KLDLREDKHY LLDHPGMIPV TTAQGEELRK QVGALYYIEC SSKTQQNVKA VFDAAIKVVI QPPTKQREKK KKKQRRGCSM
201: MNFGGRKMLC FKS
101: KWIPELQHYA PGVPVVLVGT KLDLREDKHY LLDHPGMIPV TTAQGEELRK QVGALYYIEC SSKTQQNVKA VFDAAIKVVI QPPTKQREKK KKKQRRGCSM
201: MNFGGRKMLC FKS
001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLSFSLV SRASYENVFK
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPLVKQKEKT KKKKKQKSNH
201: GCLSNVLCGR IVTRH
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPLVKQKEKT KKKKKQKSNH
201: GCLSNVLCGR IVTRH
Arabidopsis Description
ARAC10ROP11 [Source:UniProtKB/TrEMBL;Acc:A0A178UC00]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.