Factsheet for TraesCS1D01G336200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G347000.1	Wheat	cytosol	100.0	100.0
TraesCS1A01G333600.1	Wheat	cytosol	100.0	100.0
HORVU1Hr1G076880.4	Barley	cytosol	98.11	95.41
EES18497	Sorghum	cytosol	94.81	94.81
Zm00001d010732_P002	Maize	plasma membrane	91.98	91.98
Zm00001d038688_P002	Maize	cytosol	92.92	90.78
Os05t0513800-01	Rice	plasma membrane	91.51	90.65
GSMUA_Achr6P26750_001	Banana	cytosol	87.26	88.1
VIT_11s0016g03640.t01	Wine grape	cytosol, nucleus, plasma membrane	86.32	87.14
GSMUA_Achr9P06320_001	Banana	cytosol	85.85	86.67
AT4G28950.1	Thale cress	cytosol	84.43	85.65
Solyc12g007210.1.1	Tomato	cytosol	84.91	85.31
Bra011072.1-P	Field mustard	cytosol	83.96	85.17
CDY35236	Canola	cytosol	83.96	85.17
CDY06854	Canola	cytosol	83.96	85.17
PGSC0003DMT400000816	Potato	cytosol	84.43	84.83
Solyc07g020800.2.1	Tomato	cytosol	83.96	84.76
PGSC0003DMT400022302	Potato	cytosol	83.02	83.81
GSMUA_Achr8P27380_001	Banana	cytosol	82.08	83.25
TraesCS1D01G325200.1	Wheat	cytosol	72.64	78.17
TraesCS6D01G068500.2	Wheat	cytosol	71.23	76.65
TraesCS3D01G161900.1	Wheat	cytosol	77.36	75.23
TraesCS6D01G288300.1	Wheat	cytosol	73.58	73.24
TraesCS7D01G192400.1	Wheat	cytosol	71.23	70.89
KRG90165	Soybean	cytosol	38.21	67.5

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR003578
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF127
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS1D01G336200	EnsemblPlants:TraesCS1D01G336200.1	TIGR:cd04133

Description

No Description!

Coordinates

chr1D:+:426404854..426406553

Molecular Weight (calculated)

23293.2 Da

IEP (calculated)

9.455

GRAVY (calculated)

-0.050

Length

212 amino acids

Sequence
(BLAST)

001: MSVTKFIKCV TVGDGAVGKT CMLICYTSNR FPSDYIPTVF DNFSANVSVD GNIVNLGLWD TAGQEDYSRL RPLSYRGADV FVLAFSLISS ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLRDHRAYLA DHPGASAITT AQGEELRKQI GAAAYIECSS KTQQNVKAVF DTAIKVVLQP PRRREVMAAR KKTRRSSGCS
201: IMHLMCGSTC AA

Best Arabidopsis Sequence Match ( AT4G28950.1 )
(BLAST)

001: MSASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVAVD GQIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISK ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLRDDKGYLA DHTNVITSTQ GEELRKQIGA AAYIECSSKT QQNVKAVFDT AIKVVLQPPR RKEVPRRRKN HRRSGCSIAS
201: IVCGGCTAA

Arabidopsis Description

ARAC7Rac-like GTP-binding protein ARAC7 [Source:UniProtKB/Swiss-Prot;Acc:O82480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.