Factsheet for Os05t0513800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 20203239

plasma membrane: 18260611
plasma membrane: 19502382

gfp PMID: 20203239 doi

L Chen, K Shiotani, T Togashi, D Miki, M Aoyama, HL Wong, T Kawasaki, K Shimamoto

Laboratory of Plant Molecular Genetics, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, 630-0192 Japan.

msms PMID: 19502382 doi

M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto

Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G336200.1	Wheat	cytosol	90.65	91.51
TraesCS1B01G347000.1	Wheat	cytosol	90.65	91.51
TraesCS1A01G333600.1	Wheat	cytosol	90.65	91.51
EES18497	Sorghum	cytosol	90.19	91.04
Zm00001d010732_P002	Maize	plasma membrane	88.32	89.15
HORVU1Hr1G076880.4	Barley	cytosol	90.19	88.53
GSMUA_Achr6P26750_001	Banana	cytosol	86.45	88.1
GSMUA_Achr9P06320_001	Banana	cytosol	86.45	88.1
Zm00001d038688_P002	Maize	cytosol	88.78	87.56
VIT_11s0016g03640.t01	Wine grape	cytosol, nucleus, plasma membrane	85.51	87.14
Bra011072.1-P	Field mustard	cytosol	83.64	85.65
CDY06854	Canola	cytosol	83.64	85.65
CDY35236	Canola	cytosol	83.64	85.65
GSMUA_Achr8P27380_001	Banana	cytosol	83.64	85.65
AT4G28950.1	Thale cress	cytosol	83.18	85.17
PGSC0003DMT400022302	Potato	cytosol	83.18	84.76
Solyc07g020800.2.1	Tomato	cytosol	83.18	84.76
Solyc12g007210.1.1	Tomato	cytosol	81.78	82.94
PGSC0003DMT400000816	Potato	cytosol	81.31	82.46
Os01t0229400-02	Rice	endoplasmic reticulum, plasma membrane	80.84	80.84
Os02t0834000-01	Rice	cytosol	72.43	78.68
Os01t0540300-00	Rice	cytosol	32.71	78.65
Os02t0120800-01	Rice	plasma membrane	71.03	77.16
Os02t0312600-01	Rice	cytosol	68.69	74.62
Os02t0742200-01	Rice	cytosol	73.83	73.83
Os06t0234200-03	Rice	cytosol	73.36	73.02
KRG90165	Soybean	cytosol	36.92	65.83
Os11t0303400-02	Rice	cytosol	28.5	53.04

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EntrezGene:4339304	ProteinID:AAU03100.1	ProteinID:AAV59301.1	EMBL:AB029509
ProteinID:BAF17944.1	ProteinID:BAS94867.1	ProteinID:EEE64345.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	EnsemblPlantsGene:Os05g0513800	EnsemblPlants:Os05t0513800-01	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF127	UniProt:Q68Y52
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI00000AA61E	RefSeq:XP_015638759.1	:

Description

RAC/ROP-TYPE GTPASE 2Small GTP-binding protein OsRac2. (Os05t0513800-01);Similar to Rac-like GTP-binding protein 2. (Os05t0513800-02)

Coordinates

chr5:+:25474799..25477024

Molecular Weight (calculated)

23538.5 Da

IEP (calculated)

9.765

GRAVY (calculated)

-0.110

Length

214 amino acids

Sequence
(BLAST)

001: MSGATKFIKC VTVGDGAVGK TCMLICYTSN KFPTDYIPTV FDNFSANVSV DGNIVNLGLW DTAGQEDYSR LRPLSYRGAD IFVLAFSLIS RASYENVLKK
101: WMPELRRFAP NVPIVLVGTK LDLRDHRSYL ADHPAASAIT TAQGEELRKQ IGAAAYIECS SKTQQNIKAV FDTAIKVVLQ PPRRRGETTM ARKKTRRSTG
201: CSLKNLMCGS ACVV

Best Arabidopsis Sequence Match ( AT4G28950.1 )
(BLAST)

001: MSASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVAVD GQIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISK ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLRDDKGYLA DHTNVITSTQ GEELRKQIGA AAYIECSSKT QQNVKAVFDT AIKVVLQPPR RKEVPRRRKN HRRSGCSIAS
201: IVCGGCTAA

Arabidopsis Description

ARAC7Rac-like GTP-binding protein ARAC7 [Source:UniProtKB/Swiss-Prot;Acc:O82480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.