Factsheet for Os02t0834000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

cytosol: 20203239
nucleus: 20203239
plasma membrane: 20203239

gfp PMID: 20203239 doi

L Chen, K Shiotani, T Togashi, D Miki, M Aoyama, HL Wong, T Kawasaki, K Shimamoto

Laboratory of Plant Molecular Genetics, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, 630-0192 Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018573_P002	Maize	mitochondrion	97.97	97.97
HORVU6Hr1G095230.1	Barley	cytosol	95.43	95.43
TraesCS1D01G325200.1	Wheat	cytosol	94.92	94.92
TraesCS1B01G337200.1	Wheat	cytosol	94.92	94.92
GSMUA_Achr9P21050_001	Banana	cytosol	94.42	94.9
GSMUA_Achr1P02620_001	Banana	cytosol, nucleus, plastid	94.42	93.94
TraesCS1A01G323900.1	Wheat	cytosol	93.91	93.91
GSMUA_Achr7P17810_001	Banana	cytosol	93.4	93.88
GSMUA_Achr8P33920_001	Banana	cytosol	90.86	92.75
Os02t0120800-01	Rice	plasma membrane	91.88	91.88
CDX75480	Canola	cytosol	91.88	91.41
Bra011578.1-P	Field mustard	cytosol	91.88	91.41
AT4G35020.2	Thale cress	cytosol	91.88	91.41
CDX71303	Canola	cytosol	81.22	89.39
CDY31409	Canola	cytosol	80.71	88.83
Bra001994.1-P	Field mustard	cytosol, nucleus, plastid	89.34	88.44
Os02t0312600-01	Rice	cytosol	86.8	86.8
CDX69104	Canola	cytosol	89.85	83.89
CDY02239	Canola	cytosol	60.91	76.92
Bra013050.1-P	Field mustard	cytosol	60.91	76.92
Os02t0742200-01	Rice	cytosol	82.74	76.17
Os06t0234200-03	Rice	cytosol	82.74	75.81
CDX89745	Canola	cytosol	72.08	73.96
CDY02240	Canola	cytosol	71.07	73.68
KXG31438	Sorghum	cytosol	77.67	72.51
Os05t0513800-01	Rice	plasma membrane	78.68	72.43
Bra013051.1-P	Field mustard	cytosol	71.07	72.16
Os01t0540300-00	Rice	cytosol	32.49	71.91
Os01t0229400-02	Rice	endoplasmic reticulum, plasma membrane	77.16	71.03
CDX89746	Canola	cytosol	75.13	66.67
HORVU3Hr1G050750.1	Barley	cytosol, plasma membrane, plastid	23.86	51.65
Os11t0303400-02	Rice	cytosol	23.35	40.0

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EntrezGene:4331272	ProteinID:AAK27450.1	EMBL:AB036062	EMBL:AF218381
EMBL:AK067504	EMBL:AK067796	ProteinID:BAD28462.1	ProteinID:BAD28463.1	ProteinID:BAD29588.1	ProteinID:BAD29589.1
ProteinID:BAS81793.1	ProteinID:BAS81794.1	ProteinID:EEE58123.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	EnsemblPlantsGene:Os02g0834000	EnsemblPlants:Os02t0834000-01	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF249	UniProt:Q6EP31
SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI00000ACB74	RefSeq:XP_015627011.1	SEG:seg	:

Description

RAC/ROP-TYPE GTPASE 5Rac-like GTP-binding protein 5. (Os02t0834000-01);Similar to Rop4 small GTP binding protein. (Os02t0834000-02)

Coordinates

chr2:+:35880861..35885485

Molecular Weight (calculated)

21592.1 Da

IEP (calculated)

9.687

GRAVY (calculated)

-0.085

Length

197 amino acids

Sequence
(BLAST)

001: MSASRFIKCV TVGDGAVGKT CMLISYTSNT FPTDYVPTVF DNFSANVVVD GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLISK ASYENVSKKW
101: IPELRHYAPG VPIILVGTKL DLRDDKQFFV DHPGAVPIST AQGEELRKLI GAAAYIECSS KTQQNIKAVF DAAIKVVLQP PKQKKKKKKA QKGCAIL

Best Arabidopsis Sequence Match ( AT4G35020.3 )
(BLAST)

001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVIVD GNTINLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLVSK ASYENVSKKW
101: VPELRHYAPG VPIILVGTKL DLRDDKQFFA EHPGAVPIST AQGEELKKLI GAPAYIECSA KTQQNVKAVF DAAIKVVLQP PKNKKKKKRK SQKGCSIL

Arabidopsis Description

ARAC3At4g35020 [Source:UniProtKB/TrEMBL;Acc:Q5PNX9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.