CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0834000-01	Rice	cytosol	72.51	77.67
Zm00001d018573_P002	Maize	mitochondrion	72.04	77.16
HORVU6Hr1G095230.1	Barley	cytosol	69.67	74.62
GSMUA_Achr9P21050_001	Banana	cytosol	69.19	74.49
TraesCS1D01G325200.1	Wheat	cytosol	69.19	74.11
TraesCS1B01G337200.1	Wheat	cytosol	69.19	74.11
GSMUA_Achr7P17810_001	Banana	cytosol	68.72	73.98
GSMUA_Achr1P02620_001	Banana	cytosol, nucleus, plastid	69.19	73.74
GSMUA_Achr8P33920_001	Banana	cytosol	67.3	73.58
TraesCS1A01G323900.1	Wheat	cytosol	68.25	73.1
AT4G35020.2	Thale cress	cytosol	67.3	71.72
EES06186	Sorghum	cytosol	66.82	71.57
CDX75480	Canola	cytosol	66.35	70.71
Bra011578.1-P	Field mustard	cytosol	66.35	70.71
CDY02239	Canola	cytosol	51.18	69.23
Bra013050.1-P	Field mustard	cytosol	51.18	69.23
Bra001994.1-P	Field mustard	cytosol, nucleus, plastid	64.45	68.34
CDX71303	Canola	cytosol	56.87	67.04
CDY31409	Canola	cytosol	56.4	66.48
CDX69104	Canola	cytosol	64.45	64.45
EES05544	Sorghum	cytosol	61.14	60.28
EER88130	Sorghum	cytosol	61.14	60.0
CDY02240	Canola	cytosol	51.18	56.84
CDX89745	Canola	cytosol	51.66	56.77
EES18497	Sorghum	cytosol	56.87	56.6
Bra013051.1-P	Field mustard	cytosol	51.18	55.67
EES19253	Sorghum	cytosol	54.98	53.7
CDX89746	Canola	cytosol	55.92	53.15
HORVU3Hr1G050750.1	Barley	cytosol, plasma membrane, plastid	18.48	42.86

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A194YT69	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	EnsemblPlants:KXG31438	ProteinID:KXG31438	ProteinID:KXG31438.1
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF194
SMART:SM00173	SMART:SM00174	SMART:SM00175	EnsemblPlantsGene:SORBI_3004G359400	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI0007F2947E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:68621697..68626335

Molecular Weight (calculated)

23984.9 Da

IEP (calculated)

10.925

GRAVY (calculated)

-0.618

Length

211 amino acids

Sequence
(BLAST)

001: MSASRFIKCV TVGDGAVGKT CMFISYTSNT SPLHYWAVFD NFSANVVVDG STVNLGLWDT AGQEDYNRLR PCLWIPELRH YAPGVPIILV GTKLDLRDDK
101: QFFADHPGAV PIFPLPRYAK KYLLSLGRFG EELRKLIGAA AYIECSSKTQ QNIKAVFDAA IKVLLQPPKQ KKQKKQKKKK KKKKKKKKKK KKKKKKKKKK
201: KKKKKKGCTI L

Best Arabidopsis Sequence Match ( AT1G20090.1 )
(BLAST)

001: MASRFIKCVT VGDGAVGKTC MLISYTSNTF PTDYVPTVFD NFSANVVVDG NTVNLGLWDT AGQEDYNRLR PLSYRGADVF ILAFSLISKA SYENIAKKWI
101: PELRHYAPGV PIILVGTKLD LRDDKQFFID HPGAVPITTN QGEELKKLIG SAVYIECSSK TQQNVKAVFD AAIKVVLQPP KQKKKKKNKN RCAFL

Arabidopsis Description

ARAC4RAC-like GTP-binding protein ARAC4 [Source:UniProtKB/TrEMBL;Acc:Q0WU07]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.