CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 2
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92402
EER99291
KXG25872
KXG27287
KXG39465

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48040.1	KXG27287	AT1G22920.1	21798944
AT5G62880.1	KXG27287	AT1G22920.1	21798944
AT5G62880.1	EER92402	AT2G38440.1	17267444
AT5G62880.1	KXG39465	AT4G16340.1	17267444
AT5G62880.1	KXG25872	AT4G36910.1	21798944
AT5G62880.1	EER99291	AT4G38430.1	22500990
AT5G62880.1	EER92402	AT5G01730.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G288300.1	Wheat	cytosol	93.46	93.9
TraesCS6A01G309000.2	Wheat	cytosol	92.99	93.43
Os02t0742200-01	Rice	cytosol	92.99	92.99
TraesCS6B01G338000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	90.19	90.61
Solyc03g114070.2.1	Tomato	cytosol	87.38	89.05
HORVU6Hr1G076210.5	Barley	cytosol	89.25	88.84
PGSC0003DMT400063229	Potato	cytosol	86.92	88.57
KRH54429	Soybean	cytosol	26.64	87.69
EER88130	Sorghum	cytosol	87.85	87.44
GSMUA_Achr3P06090_001	Banana	cytosol, mitochondrion, plastid	86.92	86.92
VIT_17s0000g07890.t01	Wine grape	cytosol	84.11	85.71
KRH57035	Soybean	cytosol	83.18	85.17
Bra035878.1-P	Field mustard	cytosol	80.84	84.39
AT3G48040.1	Thale cress	cytosol	81.31	83.65
AT5G62880.1	Thale cress	cytosol	83.64	83.26
EES06186	Sorghum	cytosol	76.17	82.74
Bra010128.1-P	Field mustard	cytosol	80.37	82.69
Bra029240.1-P	Field mustard	cytosol	82.71	82.33
CDY30738	Canola	cytosol	82.71	82.33
GSMUA_Achr2P00650_001	Banana	cytosol	81.78	82.16
CDY56740	Canola	cytosol	82.71	81.94
CDY00332	Canola	cytosol	82.24	81.86
KRH63489	Soybean	cytosol	80.84	81.6
CDY45748	Canola	cytosol	80.84	81.22
PGSC0003DMT400063227	Potato	cytosol	59.81	80.0
CDY68200	Canola	cytosol	66.82	79.01
KRH54430	Soybean	cytosol	52.8	77.4
EES18497	Sorghum	cytosol	74.3	75.0
EES19253	Sorghum	cytosol	71.96	71.3
KRH03338	Soybean	cytosol, plastid	83.18	70.08
KXG31438	Sorghum	cytosol	60.28	61.14
Zm00001d018004_P002	Maize	cytosol, peroxisome, plastid	93.46	39.53

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EntrezGene:8075723	UniProt:C5XYW6	EnsemblPlants:EES05544	ProteinID:EES05544
ProteinID:EES05544.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF174
SMART:SM00173	SMART:SM00174	SMART:SM00175	EnsemblPlantsGene:SORBI_3004G242000	SUPFAM:SSF52540	unigene:Sbi.5347
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI0001A853B5	RefSeq:XP_002452568.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:59004706..59007737

Molecular Weight (calculated)

23906.2 Da

IEP (calculated)

9.640

GRAVY (calculated)

-0.136

Length

214 amino acids

Sequence
(BLAST)

001: MASSASRFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VDGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLV SRASYENIMK
101: KWIPELQHYA PGVPVVLVGT KLDLREDKHY LMDHPGLVPV TTAQGEELRR QIGAMYYVEC SSKTQQNVKA VFDAAIKVVI QPPTKLREKK KKKSRKGCSM
201: VNLFCGRKML CFKS

Best Arabidopsis Sequence Match ( AT5G62880.1 )
(BLAST)

001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLSFSLV SRASYENVFK
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPLVKQKEKT KKKKKQKSNH
201: GCLSNVLCGR IVTRH

Arabidopsis Description

ARAC10ROP11 [Source:UniProtKB/TrEMBL;Acc:A0A178UC00]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.