Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047701_P002 | Maize | nucleus | 79.78 | 80.59 |
| Zm00001d028803_P002 | Maize | nucleus | 67.03 | 73.09 |
| Os03t0298700-01 | Rice | cytosol | 56.73 | 56.64 |
| TraesCS4D01G190300.1 | Wheat | nucleus | 52.04 | 51.92 |
| HORVU4Hr1G055030.24 | Barley | nucleus | 52.19 | 51.44 |
| TraesCS4A01G115200.1 | Wheat | nucleus | 51.88 | 51.41 |
| TraesCS4B01G189000.1 | Wheat | nucleus | 41.66 | 46.21 |
| VIT_08s0058g00780.t01 | Wine grape | cytosol | 11.3 | 42.49 |
| CDY69042 | Canola | nucleus | 16.68 | 18.2 |
| CDY39815 | Canola | nucleus | 13.91 | 18.19 |
| GSMUA_Achr6P32700_001 | Banana | cytosol | 20.06 | 17.71 |
| KRH00374 | Soybean | cytosol | 17.37 | 17.02 |
| KXG37022 | Sorghum | nucleus | 11.45 | 16.95 |
| Bra005107.1-P | Field mustard | cytosol | 18.45 | 16.81 |
| AT2G38440.1 | Thale cress | cytosol | 17.91 | 16.65 |
| KRH40820 | Soybean | cytosol | 17.29 | 16.54 |
| CDX91460 | Canola | cytosol | 17.6 | 16.38 |
| AT5G01730.1 | Thale cress | cytosol | 14.14 | 15.73 |
| GSMUA_Achr9P04670_001 | Banana | cytosol | 15.07 | 15.69 |
| KXG31590 | Sorghum | cytosol | 16.14 | 15.31 |
| KRH76068 | Soybean | cytosol | 19.14 | 14.7 |
| KRH65511 | Soybean | cytosol | 18.83 | 14.51 |
| Solyc09g014980.2.1 | Tomato | cytosol | 17.83 | 13.62 |
| EER93209 | Sorghum | cytosol | 15.68 | 9.68 |
Protein Annotations
| Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | MapMan:20.2.2.2.4 | EntrezGene:8084019 | UniProt:C5WNF3 | EnsemblPlants:EER92402 |
| ProteinID:EER92402 | ProteinID:EER92402.1 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0030036 | InterPro:IPR003124 | PFscan:PS51082 | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF10 |
| InterPro:SCAR/WAVE_fam | EnsemblPlantsGene:SORBI_3001G402400 | UniParc:UPI0001A82B9F | InterPro:WH2_dom | RefSeq:XP_002465404.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:+:68791792..68798090
Molecular Weight (calculated)
144956.0 Da
IEP (calculated)
4.346
GRAVY (calculated)
-0.745
Length
1301 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPLSRHTVRN EYALGGRDLY RAADQHDPEA VLDGVAMAGL VGVLRQLGDL TEFAAQVFHG LYDEVMTTSA RGHGLMLRVQ QLEAELPLLE KDSCQRDYLY
0101: IASNRGVDWH SNPRVDHGVV TRGDTPRFIM DSIKQCRGPP KLFMLDKYDI GGEGACLKRY TDPSFFKTDS ACSTLLQEGI QNERRPLKAM EIRPNLQNAE
0201: IFRPPNAADN VSKLETDLSG EAMDEVPTNR RRLKYRQLNG SVFQSFRPLM QNVYEKPSSE EKLVTGDHSK VNISMNDSPE SDNEERDIMV DTSVNMEKGK
0301: VTVRKNRSIS EEALSRSSDA RSAGSSKGYN SEFDIYMDAL TTMDSDVETD LEHRGHGQCI FDRMDSDNRF SNAQNTMASR TSNFQKTDKS DVASPNRDMS
0401: NQFEKAIVST QHTKPVVGEH ERTSSLEEQF DKEKPASWDH ERTSSLEELL TEDFDATESG IREQATEEQI CNGSVTSVVS NGTQDITKTK EVKENSNIAT
0501: ISFKKIASKR SKYVGSMELI ASKVGILPRK LSKKHDAFSD SLRYMAKQLL ELKYDGTQDR DLYDFEANGV GCDVKYQETY DPPAEIKDSD VHKIPSDSPY
0601: DDVDSRKCLQ EEVNHELEHD VPPTDSPHDS VPDEENGFQD SNMVYLAGII TSCSSQEEEG CASTALDENL STGVIKHVLE HAQEKFEEHL DKEVNEDIHT
0701: EVISENASDR CEDLKEVSIY TEQVNVEDIE ESNKSDVYAL DDETAEYIEE QVSDDVVSDG MISSPVSSKQ SDDPCRITPL ALADEDDTVA CKIIDSPEVE
0801: HITLSEAFTD TDLPNVVTES VINRELAMPD NEQYYLHPKT TFGQDPILGS NEIVGKNGQA SLCSSTTAAI TPELTVSTEE KHEFHQVVYQ EPSNSLNSST
0901: EDFGDPLAPD SRDVPPSVIS SFDWMLNGAM QQSFNVLPSH PTNGNAQENG SSEDAPPLPP LPPMQWRTNK LQTGSSPLSA KIGRPPRPKP PVKQQESEAA
1001: WVLQEMSLHK GLSLQNEVVQ ATISSDHEIN QTLNMDCHEN HHQEGEDYDA QDSNPFPSSE VECLSEVASV KSENVHTLQL PELIVVPEEA WSVFGNIKFI
1101: QEQEGEHQLS NGLSVCNDIY TSDLSAQKTS QKPEIFADYK EKEFPAAGSD KVADSEENRP NGAIKQDCML NPDLPAEQKN DEHDCDDKTR EFSSALEEES
1201: SKSPTHAVPK PPRYPLLPVT SHDRSMLRAP ALVQPSSQLS DEDTLLEQIK NKSFNLKPVI AKRPNVMGGP KTNLQVVAIL ERAQAIRQAV ADDDDEDSWS
1301: E
0101: IASNRGVDWH SNPRVDHGVV TRGDTPRFIM DSIKQCRGPP KLFMLDKYDI GGEGACLKRY TDPSFFKTDS ACSTLLQEGI QNERRPLKAM EIRPNLQNAE
0201: IFRPPNAADN VSKLETDLSG EAMDEVPTNR RRLKYRQLNG SVFQSFRPLM QNVYEKPSSE EKLVTGDHSK VNISMNDSPE SDNEERDIMV DTSVNMEKGK
0301: VTVRKNRSIS EEALSRSSDA RSAGSSKGYN SEFDIYMDAL TTMDSDVETD LEHRGHGQCI FDRMDSDNRF SNAQNTMASR TSNFQKTDKS DVASPNRDMS
0401: NQFEKAIVST QHTKPVVGEH ERTSSLEEQF DKEKPASWDH ERTSSLEELL TEDFDATESG IREQATEEQI CNGSVTSVVS NGTQDITKTK EVKENSNIAT
0501: ISFKKIASKR SKYVGSMELI ASKVGILPRK LSKKHDAFSD SLRYMAKQLL ELKYDGTQDR DLYDFEANGV GCDVKYQETY DPPAEIKDSD VHKIPSDSPY
0601: DDVDSRKCLQ EEVNHELEHD VPPTDSPHDS VPDEENGFQD SNMVYLAGII TSCSSQEEEG CASTALDENL STGVIKHVLE HAQEKFEEHL DKEVNEDIHT
0701: EVISENASDR CEDLKEVSIY TEQVNVEDIE ESNKSDVYAL DDETAEYIEE QVSDDVVSDG MISSPVSSKQ SDDPCRITPL ALADEDDTVA CKIIDSPEVE
0801: HITLSEAFTD TDLPNVVTES VINRELAMPD NEQYYLHPKT TFGQDPILGS NEIVGKNGQA SLCSSTTAAI TPELTVSTEE KHEFHQVVYQ EPSNSLNSST
0901: EDFGDPLAPD SRDVPPSVIS SFDWMLNGAM QQSFNVLPSH PTNGNAQENG SSEDAPPLPP LPPMQWRTNK LQTGSSPLSA KIGRPPRPKP PVKQQESEAA
1001: WVLQEMSLHK GLSLQNEVVQ ATISSDHEIN QTLNMDCHEN HHQEGEDYDA QDSNPFPSSE VECLSEVASV KSENVHTLQL PELIVVPEEA WSVFGNIKFI
1101: QEQEGEHQLS NGLSVCNDIY TSDLSAQKTS QKPEIFADYK EKEFPAAGSD KVADSEENRP NGAIKQDCML NPDLPAEQKN DEHDCDDKTR EFSSALEEES
1201: SKSPTHAVPK PPRYPLLPVT SHDRSMLRAP ALVQPSSQLS DEDTLLEQIK NKSFNLKPVI AKRPNVMGGP KTNLQVVAIL ERAQAIRQAV ADDDDEDSWS
1301: E
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.