CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92402
EES07816
EES12008
KXG24330
KXG30555
KXG31590

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22640.1	KXG24330	AT1G13180.1	17267444
AT2G22640.1	KXG30555	AT1G13180.1	17267444
AT2G22640.1	KXG31590	AT1G29170.1	15534215
AT2G22640.1	KXG31590	AT1G29170.1	17267444
AT2G22640.1	EES07816	AT2G22640.1	17267444
AT2G22640.1	EES07816	AT2G22640.1	21798944
AT2G22640.1	EES07816	AT2G22640.1	25262777
AT2G22640.1	EER92402	AT2G38440.1	16043432
AT2G22640.1	EER92402	AT2G38440.1	17267444
AT2G22640.1	EES12008	AT3G23910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0829900-01	Rice	cytosol	96.43	94.19
TraesCS2D01G204600.1	Wheat	cytosol	92.86	88.64
TraesCS2B01G224200.1	Wheat	cytosol	92.86	88.64
TraesCS2A01G196600.1	Wheat	cytosol	92.86	88.64
GSMUA_Achr4P11860_001	Banana	cytosol	86.9	86.9
GSMUA_Achr9P23800_001	Banana	cytosol	83.33	83.33
PGSC0003DMT400043032	Potato	cytosol	80.95	80.0
AT2G22640.1	Thale cress	cytosol	76.19	75.29
KRH74448	Soybean	cytosol	76.19	75.29
Bra030221.1-P	Field mustard	cytosol	76.19	74.42
CDX89497	Canola	cytosol	76.19	74.42
CDY25614	Canola	cytosol	76.19	74.42
KRH39504	Soybean	cytosol	75.0	74.12
CDY13739	Canola	cytosol	69.05	72.5
Solyc03g043720.2.1	Tomato	cytosol	80.95	71.58
Bra039922.1-P	Field mustard	cytosol	41.67	68.63
VIT_00s0211g00050.t01	Wine grape	cytosol	39.29	61.11
HORVU2Hr1G062760.2	Barley	cytosol	48.81	47.13

Protein Annotations

Gene3D:1.20.5.110	MapMan:20.2.2.2.3	EntrezGene:8056256	InterPro:BRICK1	UniProt:C5XWQ8	ncoils:Coil
EnsemblPlants:EES07816	ProteinID:EES07816	ProteinID:EES07816.1	GO:GO:0000902	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886
GO:GO:0007015	GO:GO:0008064	GO:GO:0008150	GO:GO:0009653	GO:GO:0009987	GO:GO:0010090
GO:GO:0016020	GO:GO:0016043	GO:GO:0030154	GO:GO:0031209	GO:GO:0032403	GO:GO:0042802
GO:GO:0044877	GO:GO:0048870	GO:GO:0051259	GO:GO:0071944	PFAM:PD593487	PANTHER:PTHR33668
EnsemblPlantsGene:SORBI_3004G356500	UniParc:UPI0001A861B7	RefSeq:XP_002454840.1	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:68366732..68369289

Molecular Weight (calculated)

9368.3 Da

IEP (calculated)

6.830

GRAVY (calculated)

-0.131

Length

84 amino acids

Sequence
(BLAST)

1: MGRGGGMGNP VNVGIAVQAD WENREFISNI SLNVRRLFDF LLRFEATTKS KLATLNEKLD ILERKLEVLE VQVSSATTNP SVFN

Best Arabidopsis Sequence Match ( AT2G22640.1 )
(BLAST)

1: MAKAGGITNA VNVGIAVQAD WENREFISHI SLNVRRLFEF LVQFESTTKS KLASLNEKLD LLERRLEMLE VQVSTATANP SLFAT

Arabidopsis Description

BRK1Protein BRICK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94JY4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.