Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74448 | Soybean | cytosol | 98.82 | 98.82 |
| AT2G22640.1 | Thale cress | cytosol | 84.71 | 84.71 |
| Bra030221.1-P | Field mustard | cytosol | 84.71 | 83.72 |
| CDX89497 | Canola | cytosol | 84.71 | 83.72 |
| CDY25614 | Canola | cytosol | 84.71 | 83.72 |
| PGSC0003DMT400043032 | Potato | cytosol | 83.53 | 83.53 |
| CDY13739 | Canola | cytosol | 76.47 | 81.25 |
| GSMUA_Achr4P11860_001 | Banana | cytosol | 77.65 | 78.57 |
| Bra039922.1-P | Field mustard | cytosol | 47.06 | 78.43 |
| VIT_00s0211g00050.t01 | Wine grape | cytosol | 49.41 | 77.78 |
| EES07816 | Sorghum | cytosol | 74.12 | 75.0 |
| Solyc03g043720.2.1 | Tomato | cytosol | 83.53 | 74.74 |
| Os02t0829900-01 | Rice | cytosol | 75.29 | 74.42 |
| GSMUA_Achr9P23800_001 | Banana | cytosol | 72.94 | 73.81 |
| TraesCS2A01G196600.1 | Wheat | cytosol | 75.29 | 72.73 |
| TraesCS2B01G224200.1 | Wheat | cytosol | 75.29 | 72.73 |
| TraesCS2D01G204600.1 | Wheat | cytosol | 75.29 | 72.73 |
| HORVU2Hr1G062760.2 | Barley | cytosol | 40.0 | 39.08 |
Protein Annotations
| Gene3D:1.20.5.110 | EntrezGene:100500536 | MapMan:20.2.2.2.3 | EMBL:ACUP02005938 | InterPro:BRICK1 | EMBL:BT091473 |
| UniProt:C6T217 | ncoils:Coil | EnsemblPlantsGene:GLYMA_09G202200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0007015 | GO:GO:0008064 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0031209 | GO:GO:0032403 | GO:GO:0044877 |
| GO:GO:0048870 | EnsemblPlants:KRH39504 | ProteinID:KRH39504 | ProteinID:KRH39504.1 | PFAM:PD593487 | PANTHER:PTHR33668 |
| UniParc:UPI0001AE6198 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:42633721..42634826
Molecular Weight (calculated)
9397.2 Da
IEP (calculated)
5.654
GRAVY (calculated)
0.059
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MARAGGITNA VNVGIAVQAD WENREFISHI SLNVHRLFDF LVQFEATTKS KLASLNEKLD VLERRLELLE VQVGNASANP SLFAT
1: MAKAGGITNA VNVGIAVQAD WENREFISHI SLNVRRLFEF LVQFESTTKS KLASLNEKLD LLERRLEMLE VQVSTATANP SLFAT
Arabidopsis Description
BRK1Protein BRICK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94JY4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.