CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89366
KRH00374
KRH13046
KRH39504
KRH40820
KRH42863
KRH43411
KRH50413
KRH59222
KRH59228
KRH65511
KRH74448
KRH76068

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G49290.1	KRH59222	AT1G13180.1	17267444
AT3G49290.1	KRH59228	AT1G13180.1	17267444
AT3G49290.1	KRH42863	AT1G29170.1	17267444
AT3G49290.1	KRH39504	AT2G22640.1	17267444
AT3G49290.1	KRH74448	AT2G22640.1	17267444
AT3G49290.1	KRG89366	AT2G35110.1	17267444
AT3G49290.1	KRH50413	AT2G35110.1	17267444
AT3G49290.1	KRH00374	AT2G38440.1	17267444
AT3G49290.1	KRH40820	AT2G38440.1	17267444
AT3G49290.1	KRH65511	AT2G38440.1	17267444
AT3G49290.1	KRH76068	AT2G38440.1	17267444
AT3G49290.1	KRH13046	AT4G16340.1	17267444
AT3G49290.1	KRH43411	AT4G16340.1	17267444
AT5G24310.1	KRH42863	AT1G29170.1	17267444
AT5G24310.1	KRH39504	AT2G22640.1	17267444
AT5G24310.1	KRH74448	AT2G22640.1	17267444
AT5G24310.1	KRH13046	AT4G16340.1	17267444
AT5G24310.1	KRH43411	AT4G16340.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53518	Soybean	endoplasmic reticulum, golgi	96.62	85.56
KRH65850	Soybean	nucleus	80.62	80.86
PGSC0003DMT400047722	Potato	nucleus	68.92	70.89
Solyc03g083030.2.1	Tomato	nucleus	69.85	69.85
AT3G49290.1	Thale cress	nucleus	65.85	68.59
KRH65551	Soybean	cytosol, endoplasmic reticulum, extracellular	32.92	65.64
Bra017996.1-P	Field mustard	nucleus	64.0	65.62
CDY08121	Canola	nucleus	64.0	65.62
CDY05919	Canola	nucleus	63.08	65.08
VIT_16s0098g01720.t01	Wine grape	extracellular	73.85	65.04
AT5G24310.1	Thale cress	nucleus	63.38	64.17
CDX88092	Canola	nucleus	63.38	64.17
Bra009748.1-P	Field mustard	nucleus	63.38	63.98
CDX80429	Canola	nucleus	63.08	63.08
GSMUA_Achr5P09600_001	Banana	nucleus	28.92	52.51
GSMUA_Achr1P28080_001	Banana	cytosol	47.38	47.38
KRH06553	Soybean	nucleus	25.85	27.01
KRG97096	Soybean	cytosol	24.92	26.91
KRH48004	Soybean	nucleus	25.54	26.69
KRH68849	Soybean	cytosol	23.38	25.68
KRH41556	Soybean	nucleus	14.46	18.73
KRH60267	Soybean	cytosol	14.15	18.4
KRH39303	Soybean	nucleus	14.15	18.04
KRH48370	Soybean	nucleus	13.85	17.58

Protein Annotations

EMBL:ACUP02002765	EnsemblPlants:KRH64414	EnsemblPlantsGene:GLYMA_04G234500	EntrezGene:100806297	InterPro:ABI	PANTHER:PTHR10460
PANTHER:PTHR10460:SF10	ProteinID:KRH64414	ProteinID:KRH64414.1	ProteinID:KRH64415.1	SEG:seg	UniParc:UPI0002339F17
UniProt:K7KLW7	MapMan:20.2.2.2.5	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:50292521..50297654

Molecular Weight (calculated)

37110.8 Da

IEP (calculated)

10.012

GRAVY (calculated)

-0.865

Length

325 amino acids

Sequence
(BLAST)

001: MGKVATSATL PVSQEASNYD EVFMQQSLLF DDSLKDLKNL RAQLYSAAEY FELSYSNDDQ KQIVVETLKD YAIKALVNTV DHLGSVTYKV NDLLDEKVVE
101: VSVAELRVSC IEQRIKTCHE YMDREGRTQQ SLVISTPKYH KRYILPVGET MHGANRTKSK YVGYNLDDEG EWPHFRNAVR ATIRETPPST ARRGRSPSPS
201: LQPQSSGAFS FTSTMPKKDL ERRSVSPYRF PLLRTGSRSS RPPTPKISRP TTPNPSRPTT PNPSNARQRY PSEPRKSSSM RLSAERDHGK DIEQYPSKSK
301: RLLKALLSRR KSKKDDMLYT YLDEY

Best Arabidopsis Sequence Match ( AT3G49290.1 )
(BLAST)

001: MPASHEASNY DEVSMQQSML FSDGLQDLKN LRAQLYSAAE YFELSYTTDD KKQIVVETLK DYAVKALVNT VDHLGSVTYK VNDFIDEKVD EVSETELRVS
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIDTPKF HKRYILPAGE IMTATNLEKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PVRKSTSQSS SPRQPPQRSA
201: TFSFTSTIPK KEQDKRSVSP HRFPLLRSGS VATRKSASIS RPTTPSKSRS ITPIRYPSEP RRSASVRVAF EKDNQKETEQ QQPSKSKRLL KALLSRRKTK
301: KDDTLYTFLD EY

Arabidopsis Description

ABIL2At3g49290 [Source:UniProtKB/TrEMBL;Acc:Q147L2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.