Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG89366 | Soybean | nucleus | 95.22 | 35.88 |
| VIT_01s0011g01630.t01 | Wine grape | cytosol, plastid | 75.14 | 28.23 |
| Solyc02g068720.2.1 | Tomato | nucleus | 69.79 | 26.35 |
| CDY31664 | Canola | cytosol | 66.54 | 25.11 |
| CDX84262 | Canola | nucleus | 66.35 | 25.02 |
| Bra005368.1-P | Field mustard | nucleus | 66.54 | 24.87 |
| AT2G35110.1 | Thale cress | cytosol | 67.11 | 24.63 |
| GSMUA_Achr10P... | Banana | cytosol | 57.55 | 23.37 |
| Os08t0544500-01 | Rice | plasma membrane | 54.49 | 20.97 |
| TraesCS7B01G167200.1 | Wheat | cytosol | 52.58 | 20.27 |
| TraesCS7A01G268900.4 | Wheat | cytosol | 52.58 | 20.09 |
| KXG22838 | Sorghum | cytosol | 52.01 | 20.03 |
| TraesCS7D01G269500.4 | Wheat | cytosol | 52.77 | 19.97 |
| HORVU7Hr1G056570.7 | Barley | mitochondrion | 52.58 | 19.46 |
| Zm00001d046391_P001 | Maize | plasma membrane | 5.74 | 9.52 |
Protein Annotations
| EMBL:ACUP02004691 | EnsemblPlants:KRH50413 | EnsemblPlantsGene:GLYMA_07G221000 | InterPro:Nck-associated_protein-1 | ncoils:Coil | PANTHER:PTHR12093 |
| PANTHER:PTHR12093:SF10 | PFAM:PF09735 | ProteinID:KRH50413 | ProteinID:KRH50413.1 | SEG:seg | UniParc:UPI0006EE06DA |
| UniProt:A0A0R0J6K6 | MapMan:20.2.2.2.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:39609557..39611904
Molecular Weight (calculated)
57723.2 Da
IEP (calculated)
6.203
GRAVY (calculated)
-0.238
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MRECILGNFR RRLLGVLKTD NDLQRPTVLE SLIKRHISIV HLAEQHISMD ITQGIREVLL SEAFPGPVSS LHLFEKPTDQ HTGLATESVC NWYIENIIKD
101: VSGAGILFVP IHKCFRSTRP VGGYFAESVT DLRELQAFVR IFGGYGVDRL DRMLKEHTDA LLNCIDTSLR SNRDVIEAVA TSLHAGDRIE REASVKQIVD
201: LETGIGFCVQ AGLALAFDQL LAEASGAILE EGAPLIHSLL DGVVKHLPDG VPEKEEIRRM RTVANTVGVN NHDSVWVRSI LEEVGGASDG SWGLLPYLFA
301: TFMTSNIWST TAFNVDTEGF SNNIHCLARC ISAVIAGSEF ARLEREHQHR QSLTNGHASD RMDPELSSHM SAEASIKSTL QLFVKLSADI IQDSWSETHR
401: SSLETHVPYA ILRSVYSQYY ADTQSTPLAI LNTSLITPHP RGGDSPQYYG HESGYFEGSS SHSQEHLYEA DIGSLRSMDN KQRNDYSASR SRVKSVEGST
501: SGSTGPSPLP RFAVSRSGPL AYK
101: VSGAGILFVP IHKCFRSTRP VGGYFAESVT DLRELQAFVR IFGGYGVDRL DRMLKEHTDA LLNCIDTSLR SNRDVIEAVA TSLHAGDRIE REASVKQIVD
201: LETGIGFCVQ AGLALAFDQL LAEASGAILE EGAPLIHSLL DGVVKHLPDG VPEKEEIRRM RTVANTVGVN NHDSVWVRSI LEEVGGASDG SWGLLPYLFA
301: TFMTSNIWST TAFNVDTEGF SNNIHCLARC ISAVIAGSEF ARLEREHQHR QSLTNGHASD RMDPELSSHM SAEASIKSTL QLFVKLSADI IQDSWSETHR
401: SSLETHVPYA ILRSVYSQYY ADTQSTPLAI LNTSLITPHP RGGDSPQYYG HESGYFEGSS SHSQEHLYEA DIGSLRSMDN KQRNDYSASR SRVKSVEGST
501: SGSTGPSPLP RFAVSRSGPL AYK
0001: MANSRQYYPS QDESMSPTSV RSREWEGPSR WTEYLGPEMA ASVSSTRSSK QIDGHVGGST KALNIQWVVQ MIEVADGLMA KMYRLNQILE YPDPVGHVFS
0101: EAFWKAGVFP NHPRICTLLS KKFPEHFSKL QLERIDKFSL DSLHDGAELH LQSLEPWIQL LLDLMAFREQ ALRLILDLSS TVITLLPHQN SLILHAFMDL
0201: FCAFVRVNLF AEKIPRKMLL QVYNLLHALS RNDRDCDFYH RLVQFIDSYD PPLKGLQEDL NFVSPRIGEV LEAVGPSIFL SADTRKLRNE GFLSPYHPRF
0301: PDILTNSAHP MRAQDLANVT SYREWVLLGY LVCPDELLRV TSIDIALVVL KENLVVTLFR DEVSLYQMVC EKEFGIGISF ASADSINLTM QYILLHEDYQ
0401: LYVLPRVLES KKMAKSGRTK QKEADLEYSV AKQVEKMISE VHEQALQLCD TIHRERRILL KQEIGRMVLF FTDQPSLLAP NIQMVFSALA LAQSEVLWYF
0501: QHAGIASSRS KAARVIPVDI DPNDPTIGFL LDGMDRLCCL VRKYISAARG YALSYLSSSA GRIRYLMGTP GIVALDLDPT LKGLFQRIVQ HLESIPKAQG
0601: ENVSAITCDL SDFRKDWLSI LMIVTSSRSS INIRHLEKAT VSTGKEGLLS EGNAAYNWSR CVDELESQLS KHGSLKKLYF YHQHLTTVFR NTMFGPEGRP
0701: QHCCAWLSVA SSFPECASLI IPEEVTKFGR DAVLYVESLI ESIMGGLEGL INILDSEGGF GALESQLLPE QAAAYLNNAS RISAPSVKSP RVVGGFTLPG
0801: HESYPENNKS IKMLEAAIQR LTNLCSILND MEPICVINHV FVLREYMREC ILGNFKRRFL TALQTDNDLQ RPSVLESLIR RHMGIVHLAE QHVSMDLTQG
0901: IREILLTEAF SGPVSSLHTF EKPAEQQQTT GSAVEVVCNW YMDNIIKDVS GAGILFAPRH KYFKSTRPVG GYFAESVTDL KELQAFVRIF GGYGVDRLDR
1001: MMKVHTAALV NCIETSLRSN RELIEAAAAS MHSGDRVERD ASVRQIVDLD TVIGFCIEAG QALAFDDLLA EASGAVLEDN ASLIHSMISG IVEHIPEEIP
1101: EKKEIRRIKG VANGVGVAGD HDSEWVRLIL EEVGGANDNS WSLLPYFFAS FMTSNAWNTT GFNIETGGFS NNIHCLARCI SAVIAGSEYV RLQREYQQQH
1201: QSLSNGHHSS ENLDSEFPPR VTAEASIKSS MLLFVKFAAS IVLDSWSEAN RSHLVAKLIF LDQLCEISPY LPRSSLESHV PYTILRSIYT QYYSNTPSTP
1301: LSTASPYHSP SVSLIHASPS MKNSTTPQRG SGSGSSSTAA PDSGYFKGSS SSLYGQEHYT ESETGNSRNN ENNNNNKQRG SSRRSGPLDY SSSHKGGSGS
1401: NSTGPSPLPR FAVSRSGPIS YKQHN
0101: EAFWKAGVFP NHPRICTLLS KKFPEHFSKL QLERIDKFSL DSLHDGAELH LQSLEPWIQL LLDLMAFREQ ALRLILDLSS TVITLLPHQN SLILHAFMDL
0201: FCAFVRVNLF AEKIPRKMLL QVYNLLHALS RNDRDCDFYH RLVQFIDSYD PPLKGLQEDL NFVSPRIGEV LEAVGPSIFL SADTRKLRNE GFLSPYHPRF
0301: PDILTNSAHP MRAQDLANVT SYREWVLLGY LVCPDELLRV TSIDIALVVL KENLVVTLFR DEVSLYQMVC EKEFGIGISF ASADSINLTM QYILLHEDYQ
0401: LYVLPRVLES KKMAKSGRTK QKEADLEYSV AKQVEKMISE VHEQALQLCD TIHRERRILL KQEIGRMVLF FTDQPSLLAP NIQMVFSALA LAQSEVLWYF
0501: QHAGIASSRS KAARVIPVDI DPNDPTIGFL LDGMDRLCCL VRKYISAARG YALSYLSSSA GRIRYLMGTP GIVALDLDPT LKGLFQRIVQ HLESIPKAQG
0601: ENVSAITCDL SDFRKDWLSI LMIVTSSRSS INIRHLEKAT VSTGKEGLLS EGNAAYNWSR CVDELESQLS KHGSLKKLYF YHQHLTTVFR NTMFGPEGRP
0701: QHCCAWLSVA SSFPECASLI IPEEVTKFGR DAVLYVESLI ESIMGGLEGL INILDSEGGF GALESQLLPE QAAAYLNNAS RISAPSVKSP RVVGGFTLPG
0801: HESYPENNKS IKMLEAAIQR LTNLCSILND MEPICVINHV FVLREYMREC ILGNFKRRFL TALQTDNDLQ RPSVLESLIR RHMGIVHLAE QHVSMDLTQG
0901: IREILLTEAF SGPVSSLHTF EKPAEQQQTT GSAVEVVCNW YMDNIIKDVS GAGILFAPRH KYFKSTRPVG GYFAESVTDL KELQAFVRIF GGYGVDRLDR
1001: MMKVHTAALV NCIETSLRSN RELIEAAAAS MHSGDRVERD ASVRQIVDLD TVIGFCIEAG QALAFDDLLA EASGAVLEDN ASLIHSMISG IVEHIPEEIP
1101: EKKEIRRIKG VANGVGVAGD HDSEWVRLIL EEVGGANDNS WSLLPYFFAS FMTSNAWNTT GFNIETGGFS NNIHCLARCI SAVIAGSEYV RLQREYQQQH
1201: QSLSNGHHSS ENLDSEFPPR VTAEASIKSS MLLFVKFAAS IVLDSWSEAN RSHLVAKLIF LDQLCEISPY LPRSSLESHV PYTILRSIYT QYYSNTPSTP
1301: LSTASPYHSP SVSLIHASPS MKNSTTPQRG SGSGSSSTAA PDSGYFKGSS SSLYGQEHYT ESETGNSRNN ENNNNNKQRG SSRRSGPLDY SSSHKGGSGS
1401: NSTGPSPLPR FAVSRSGPIS YKQHN
Arabidopsis Description
NAP1Protein NAP1 [Source:UniProtKB/Swiss-Prot;Acc:Q5S2C4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.