CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89366
KRH00374
KRH13046
KRH39504
KRH40820
KRH42863
KRH43411
KRH50413
KRH59222
KRH59228
KRH65511
KRH74448
KRH76068

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G49290.1	KRH59222	AT1G13180.1	17267444
AT3G49290.1	KRH59228	AT1G13180.1	17267444
AT3G49290.1	KRH42863	AT1G29170.1	17267444
AT3G49290.1	KRH39504	AT2G22640.1	17267444
AT3G49290.1	KRH74448	AT2G22640.1	17267444
AT3G49290.1	KRG89366	AT2G35110.1	17267444
AT3G49290.1	KRH50413	AT2G35110.1	17267444
AT3G49290.1	KRH00374	AT2G38440.1	17267444
AT3G49290.1	KRH40820	AT2G38440.1	17267444
AT3G49290.1	KRH65511	AT2G38440.1	17267444
AT3G49290.1	KRH76068	AT2G38440.1	17267444
AT3G49290.1	KRH13046	AT4G16340.1	17267444
AT3G49290.1	KRH43411	AT4G16340.1	17267444
AT5G24310.1	KRH42863	AT1G29170.1	17267444
AT5G24310.1	KRH39504	AT2G22640.1	17267444
AT5G24310.1	KRH74448	AT2G22640.1	17267444
AT5G24310.1	KRH13046	AT4G16340.1	17267444
AT5G24310.1	KRH43411	AT4G16340.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64414	Soybean	nucleus	80.86	80.62
KRH53518	Soybean	endoplasmic reticulum, golgi	81.17	71.66
PGSC0003DMT400047722	Potato	nucleus	67.28	68.99
Solyc03g083030.2.1	Tomato	nucleus	68.21	68.0
AT3G49290.1	Thale cress	nucleus	63.27	65.71
Bra017996.1-P	Field mustard	nucleus	62.35	63.72
CDY08121	Canola	nucleus	62.35	63.72
CDY05919	Canola	nucleus	61.73	63.49
AT5G24310.1	Thale cress	nucleus	61.73	62.31
VIT_16s0098g01720.t01	Wine grape	extracellular	70.68	62.06
CDX88092	Canola	nucleus	61.11	61.68
Bra009748.1-P	Field mustard	nucleus	61.11	61.49
CDX80429	Canola	nucleus	60.8	60.62
KRH65551	Soybean	cytosol, endoplasmic reticulum, extracellular	29.32	58.28
GSMUA_Achr5P09600_001	Banana	nucleus	27.47	49.72
GSMUA_Achr1P28080_001	Banana	cytosol	44.75	44.62
KRG97096	Soybean	cytosol	24.38	26.25
KRH48004	Soybean	nucleus	24.69	25.72
KRH06553	Soybean	nucleus	24.38	25.4
KRH68849	Soybean	cytosol	22.84	25.0
KRH60267	Soybean	cytosol	13.58	17.6
KRH41556	Soybean	nucleus	13.58	17.53
KRH39303	Soybean	nucleus	13.27	16.86
KRH48370	Soybean	nucleus	12.96	16.41

Protein Annotations

EMBL:ACUP02001667	EnsemblPlants:KRH65850	EnsemblPlantsGene:GLYMA_03G066300	EntrezGene:100808485	InterPro:ABI	PANTHER:PTHR10460
PANTHER:PTHR10460:SF10	ProteinID:KRH65848.1	ProteinID:KRH65849.1	ProteinID:KRH65850	ProteinID:KRH65850.1	SEG:seg
UniParc:UPI000233ACBC	UniProt:K7M7B3	MapMan:20.2.2.2.5	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:12856804..12861551

Molecular Weight (calculated)

37018.8 Da

IEP (calculated)

9.734

GRAVY (calculated)

-0.820

Length

324 amino acids

Sequence
(BLAST)

001: MGKIATQPLS REASNYDEVF MQQSLLFDDS LKDLKNLRTQ LYSAAEYFEL SYANDDQKQI VIETLKDYAI KALINSVDHL GSVTYKVNDL LDEKIVEVSE
101: TQLRLSCIQQ RISTCHAFMD HEGRTQQSLV IDAPKYHKRY ILPAGETLRG AKLTKSIYMG CSLDDEDDWH HFRNAVRATI RETPTSTESK GRSPSPSLQP
201: QRAGAFSFTS TMPKKDLEKR TVSPYRFPLL RTGSMSGRPT TPKNSRPTTP NSSRRPTTSS PSDARLMYPS EPRKSASMRL PAERDSNKDV EHQHHSKSKR
301: LLKSLLSRRK SKKDDLLYTY LDEY

Best Arabidopsis Sequence Match ( AT3G49290.1 )
(BLAST)

001: MPASHEASNY DEVSMQQSML FSDGLQDLKN LRAQLYSAAE YFELSYTTDD KKQIVVETLK DYAVKALVNT VDHLGSVTYK VNDFIDEKVD EVSETELRVS
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIDTPKF HKRYILPAGE IMTATNLEKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PVRKSTSQSS SPRQPPQRSA
201: TFSFTSTIPK KEQDKRSVSP HRFPLLRSGS VATRKSASIS RPTTPSKSRS ITPIRYPSEP RRSASVRVAF EKDNQKETEQ QQPSKSKRLL KALLSRRKTK
301: KDDTLYTFLD EY

Arabidopsis Description

ABIL2At3g49290 [Source:UniProtKB/TrEMBL;Acc:Q147L2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.