CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 1
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 3
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89366
KRH00374
KRH13046
KRH39504
KRH40820
KRH42863
KRH43411
KRH50413
KRH59222
KRH59228
KRH65511
KRH74448
KRH76068

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G49290.1	KRH59222	AT1G13180.1	17267444
AT3G49290.1	KRH59228	AT1G13180.1	17267444
AT3G49290.1	KRH42863	AT1G29170.1	17267444
AT3G49290.1	KRH39504	AT2G22640.1	17267444
AT3G49290.1	KRH74448	AT2G22640.1	17267444
AT3G49290.1	KRG89366	AT2G35110.1	17267444
AT3G49290.1	KRH50413	AT2G35110.1	17267444
AT3G49290.1	KRH00374	AT2G38440.1	17267444
AT3G49290.1	KRH40820	AT2G38440.1	17267444
AT3G49290.1	KRH65511	AT2G38440.1	17267444
AT3G49290.1	KRH76068	AT2G38440.1	17267444
AT3G49290.1	KRH13046	AT4G16340.1	17267444
AT3G49290.1	KRH43411	AT4G16340.1	17267444
AT5G24310.1	KRH42863	AT1G29170.1	17267444
AT5G24310.1	KRH39504	AT2G22640.1	17267444
AT5G24310.1	KRH74448	AT2G22640.1	17267444
AT5G24310.1	KRH13046	AT4G16340.1	17267444
AT5G24310.1	KRH43411	AT4G16340.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64414	Soybean	nucleus	85.56	96.62
KRH65850	Soybean	nucleus	71.66	81.17
PGSC0003DMT400047722	Potato	nucleus	61.31	71.2
Solyc03g083030.2.1	Tomato	nucleus	62.13	70.15
AT3G49290.1	Thale cress	nucleus	58.86	69.23
KRH65551	Soybean	cytosol, endoplasmic reticulum, extracellular	30.25	68.1
Bra017996.1-P	Field mustard	nucleus	57.22	66.25
CDY08121	Canola	nucleus	57.22	66.25
CDY05919	Canola	nucleus	56.4	65.71
CDX88092	Canola	nucleus	57.22	65.42
Bra009748.1-P	Field mustard	nucleus	57.22	65.22
VIT_16s0098g01720.t01	Wine grape	extracellular	65.4	65.04
AT5G24310.1	Thale cress	nucleus	56.68	64.8
CDX80429	Canola	nucleus	56.95	64.31
GSMUA_Achr5P09600_001	Banana	nucleus	25.61	52.51
GSMUA_Achr1P28080_001	Banana	cytosol	41.14	46.46
KRH06553	Soybean	nucleus	23.16	27.33
KRG97096	Soybean	cytosol	22.34	27.24
KRH48004	Soybean	nucleus	22.89	27.01
KRH68849	Soybean	cytosol	20.98	26.01
KRH41556	Soybean	nucleus	13.08	19.12
KRH60267	Soybean	cytosol	12.81	18.8
KRH39303	Soybean	nucleus	12.53	18.04
KRH48370	Soybean	nucleus	12.26	17.58

Protein Annotations

EMBL:ACUP02003472	EnsemblPlants:KRH53518	EnsemblPlantsGene:GLYMA_06G130100	EntrezGene:100781924	InterPro:ABI	PANTHER:PTHR10460
PANTHER:PTHR10460:SF10	ProteinID:KRH53518	ProteinID:KRH53518.1	SEG:seg	UniParc:UPI0006ED9D2C	UniProt:A0A0R0JG66
MapMan:20.2.2.2.5	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:10695788..10699675

Molecular Weight (calculated)

42003.9 Da

IEP (calculated)

9.745

GRAVY (calculated)

-0.699

Length

367 amino acids

Sequence
(BLAST)

001: MFNFLSSVDP KLSQRIVFYM DADVLFQTTI CCVVLLPLLS FMGKVTTSAT QPVSQEASNY DEVFMQQSLL FDDSLKDLKN LRAQLYSAAE YFELSYSNDD
101: QKQVVVETLK DYAIKALVNT VDHLGSVTYK VNDLLDEKVV EVSVAELRVS CIEQRIKTCH EYMDHEGRTQ QSLVISTPKY HKRYILPVGE TMHGANRTKS
201: KHVGYNLDDE DEWPNFRNAV RATIRETPPS TARRGRSPSP SLQPQRSGAF SFTSTMPKKD LERRSVSPYR FPLLRTGSRS SSRPTTPKIS RPTTPNPSRP
301: TTPNPSNARQ RYPSEPRKSS SMRLSAERDH GKELEQYPSK SKRLLKALLS RRKSKKDDML YTYLDEY

Best Arabidopsis Sequence Match ( AT3G49290.1 )
(BLAST)

001: MPASHEASNY DEVSMQQSML FSDGLQDLKN LRAQLYSAAE YFELSYTTDD KKQIVVETLK DYAVKALVNT VDHLGSVTYK VNDFIDEKVD EVSETELRVS
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIDTPKF HKRYILPAGE IMTATNLEKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PVRKSTSQSS SPRQPPQRSA
201: TFSFTSTIPK KEQDKRSVSP HRFPLLRSGS VATRKSASIS RPTTPSKSRS ITPIRYPSEP RRSASVRVAF EKDNQKETEQ QQPSKSKRLL KALLSRRKTK
301: KDDTLYTFLD EY

Arabidopsis Description

ABIL2At3g49290 [Source:UniProtKB/TrEMBL;Acc:Q147L2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.