Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P09600_001 | Banana | nucleus | 30.77 | 55.87 |
| GSMUA_Achr10P... | Banana | cytosol | 25.23 | 54.67 |
| KRH64414 | Soybean | nucleus | 47.38 | 47.38 |
| PGSC0003DMT400047722 | Potato | nucleus | 45.23 | 46.52 |
| KRH65850 | Soybean | nucleus | 44.62 | 44.75 |
| Solyc03g083030.2.1 | Tomato | nucleus | 44.62 | 44.62 |
| AT3G49290.1 | Thale cress | nucleus | 42.77 | 44.55 |
| CDX88092 | Canola | nucleus | 43.08 | 43.61 |
| Bra009748.1-P | Field mustard | nucleus | 43.08 | 43.48 |
| GSMUA_Achr7P14650_001 | Banana | nucleus | 23.38 | 43.43 |
| Bra017996.1-P | Field mustard | nucleus | 42.15 | 43.22 |
| CDY08121 | Canola | nucleus | 42.15 | 43.22 |
| CDY05919 | Canola | nucleus | 41.85 | 43.17 |
| AT5G24310.1 | Thale cress | nucleus | 42.46 | 42.99 |
| VIT_16s0098g01720.t01 | Wine grape | extracellular | 48.62 | 42.82 |
| CDX80429 | Canola | nucleus | 42.46 | 42.46 |
| KRH53518 | Soybean | endoplasmic reticulum, golgi | 46.46 | 41.14 |
| KRH65551 | Soybean | cytosol, endoplasmic reticulum, extracellular | 19.69 | 39.26 |
| GSMUA_Achr3P31930_001 | Banana | nucleus | 19.38 | 31.34 |
| GSMUA_Achr6P31890_001 | Banana | nucleus | 18.15 | 29.65 |
| GSMUA_Achr7P24740_001 | Banana | nucleus | 19.08 | 29.25 |
| GSMUA_Achr9P06340_001 | Banana | nucleus | 13.23 | 27.92 |
| GSMUA_Achr8P19680_001 | Banana | nucleus | 26.77 | 27.36 |
| GSMUA_Achr3P15790_001 | Banana | nucleus | 20.0 | 26.0 |
| GSMUA_Achr6P26790_001 | Banana | cytosol | 13.23 | 24.86 |
| GSMUA_Achr9P05390_001 | Banana | cytosol, nucleus, plastid | 18.15 | 22.18 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P28080_001 | EnsemblPlants:GSMUA_Achr1T28080_001 | EnsemblPlantsGene:GSMUA_Achr1G28080_001 | InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF10 |
| SEG:seg | UniParc:UPI0002956804 | UniProt:M0S3R5 | MapMan:20.2.2.2.5 | : | : |
Description
Putative protein ABIL2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G28080_001]
Coordinates
chr1:-:27000201..27002348
Molecular Weight (calculated)
36026.8 Da
IEP (calculated)
10.337
GRAVY (calculated)
-0.614
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQSLLFSDS LKELKNLRSQ LYSAAEYFEL SYATDDHKQF VVNTLREYAI KAVVNTVDHL GSVSFKVTGL LEAKVDEVSG AESRVSCIEQ RIRACRELVD
101: REGLSQQSLV IKAPRYHKRY IVPGKLISLG VFVDTDVIVS DASSSVGCSV GKSMPESGRH ATPKYEKNLN ASKDNTETHK FQPVHHPTVA DKAPSFRKAR
201: TMSPAPSSRA RSVSPRRIPS SSPSQLPGKL FGAEKRATSP IRMPNPLARS GSLAVRPTAL RSTSSIGRQY SSATQKSASM RLHAERNDDK DGEQNPSKGK
301: KFLKSLLSRR KSKKDEMVYS YLDEY
101: REGLSQQSLV IKAPRYHKRY IVPGKLISLG VFVDTDVIVS DASSSVGCSV GKSMPESGRH ATPKYEKNLN ASKDNTETHK FQPVHHPTVA DKAPSFRKAR
201: TMSPAPSSRA RSVSPRRIPS SSPSQLPGKL FGAEKRATSP IRMPNPLARS GSLAVRPTAL RSTSSIGRQY SSATQKSASM RLHAERNDDK DGEQNPSKGK
301: KFLKSLLSRR KSKKDEMVYS YLDEY
001: MSAAATMPMP REASNYDEIS MQQSMLFSDS LKDLKNLRTQ LYSAAEYFEL SYTNDEQKQI VVETLKDYAI KALVNTVDHL GSVTYKVNDF VDEKVDEVAG
101: TELRVSCIEQ RLRMCQEYMD HEGRSQQSLV IDTPKFHKRY FLPSGEIKRG GNLAKLKNVE GSFDGEDDWN QFRNAVRATI RETPPPPVRK PILQSPSQRK
201: PQRSATFSFS SIATAPKKEQ DKRAVSPHRF PLLRSGSVAI RPSSISRPTT PSKSRAVTPT PKRYPSEPRR SASVRVAFEK EAQKEPEHQQ QPSKSKRLLK
301: ALLSRRKTKK DDTLYTYLDE Y
101: TELRVSCIEQ RLRMCQEYMD HEGRSQQSLV IDTPKFHKRY FLPSGEIKRG GNLAKLKNVE GSFDGEDDWN QFRNAVRATI RETPPPPVRK PILQSPSQRK
201: PQRSATFSFS SIATAPKKEQ DKRAVSPHRF PLLRSGSVAI RPSSISRPTT PSKSRAVTPT PKRYPSEPRR SASVRVAFEK EAQKEPEHQQ QPSKSKRLLK
301: ALLSRRKTKK DDTLYTYLDE Y
Arabidopsis Description
ABIL3Protein ABIL3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMC6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.