Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P09600_001 | Banana | nucleus | 41.72 | 37.99 |
| KRH64414 | Soybean | nucleus | 65.64 | 32.92 |
| KRH53518 | Soybean | endoplasmic reticulum, golgi | 68.1 | 30.25 |
| KRH65850 | Soybean | nucleus | 58.28 | 29.32 |
| AT3G49290.1 | Thale cress | nucleus | 51.53 | 26.92 |
| PGSC0003DMT400047722 | Potato | nucleus | 50.92 | 26.27 |
| Solyc03g083030.2.1 | Tomato | nucleus | 51.53 | 25.85 |
| AT5G24310.1 | Thale cress | nucleus | 50.31 | 25.55 |
| CDX88092 | Canola | nucleus | 49.69 | 25.23 |
| Bra009748.1-P | Field mustard | nucleus | 49.69 | 25.16 |
| CDY05919 | Canola | nucleus | 48.47 | 25.08 |
| Bra017996.1-P | Field mustard | nucleus | 48.47 | 24.92 |
| CDY08121 | Canola | nucleus | 48.47 | 24.92 |
| CDX80429 | Canola | nucleus | 49.08 | 24.62 |
| VIT_16s0098g01720.t01 | Wine grape | extracellular | 53.99 | 23.85 |
| GSMUA_Achr1P28080_001 | Banana | cytosol | 39.26 | 19.69 |
| KRH48004 | Soybean | nucleus | 35.58 | 18.65 |
| KRH06553 | Soybean | nucleus | 35.58 | 18.65 |
| KRG97096 | Soybean | cytosol | 33.74 | 18.27 |
| KRH68849 | Soybean | cytosol | 30.67 | 16.89 |
| KRH39303 | Soybean | nucleus | 19.02 | 12.16 |
| KRH60267 | Soybean | cytosol | 17.79 | 11.6 |
| KRH41556 | Soybean | nucleus | 17.79 | 11.55 |
| KRH48370 | Soybean | nucleus | 16.56 | 10.55 |
Protein Annotations
| EMBL:ACUP02001384 | EnsemblPlants:KRH65551 | EnsemblPlantsGene:GLYMA_03G044700 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF10 | ProteinID:KRH65551 | ProteinID:KRH65551.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0006EDD826 | UniProt:A0A0R0KQY5 | MapMan:20.2.2.2.5 | : | : |
Description
hypothetical protein
Coordinates
chr3:-:5683772..5685024
Molecular Weight (calculated)
19302.4 Da
IEP (calculated)
6.679
GRAVY (calculated)
0.083
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKVTTFVAQ PVSQEASNYD EVFLQLSLLF DDILKVLMIF YMLFTEYFEF SYSNDDQKQV VVETLKDYAI KALVNRVDHL GYVTYKVNDL LEEEVVKVFV
101: VELRVLTIKI CHKYMDHEGR TQQSLVIGTP KYHKRYILLS KYPKFSYTLS SYGVAFFFHF YYI
101: VELRVLTIKI CHKYMDHEGR TQQSLVIGTP KYHKRYILLS KYPKFSYTLS SYGVAFFFHF YYI
001: MPASHEASNY DEVSMQQSML FSDGLQDLKN LRAQLYSAAE YFELSYTTDD KKQIVVETLK DYAVKALVNT VDHLGSVTYK VNDFIDEKVD EVSETELRVS
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIDTPKF HKRYILPAGE IMTATNLEKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PVRKSTSQSS SPRQPPQRSA
201: TFSFTSTIPK KEQDKRSVSP HRFPLLRSGS VATRKSASIS RPTTPSKSRS ITPIRYPSEP RRSASVRVAF EKDNQKETEQ QQPSKSKRLL KALLSRRKTK
301: KDDTLYTFLD EY
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIDTPKF HKRYILPAGE IMTATNLEKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PVRKSTSQSS SPRQPPQRSA
201: TFSFTSTIPK KEQDKRSVSP HRFPLLRSGS VATRKSASIS RPTTPSKSRS ITPIRYPSEP RRSASVRVAF EKDNQKETEQ QQPSKSKRLL KALLSRRKTK
301: KDDTLYTFLD EY
Arabidopsis Description
ABIL2At3g49290 [Source:UniProtKB/TrEMBL;Acc:Q147L2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.