Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76068 | Soybean | cytosol | 81.1 | 80.81 |
| VIT_08s0058g00780.t01 | Wine grape | cytosol | 13.09 | 63.87 |
| KRH40820 | Soybean | cytosol | 27.01 | 33.53 |
| KRH00374 | Soybean | cytosol | 26.18 | 33.28 |
| AT2G38440.1 | Thale cress | cytosol | 21.21 | 25.59 |
| CDX91460 | Canola | cytosol | 20.91 | 25.25 |
| Bra005107.1-P | Field mustard | cytosol | 20.38 | 24.09 |
| Solyc09g014980.2.1 | Tomato | cytosol | 23.82 | 23.59 |
| CDY69042 | Canola | nucleus | 16.35 | 23.15 |
| Zm00001d028803_P002 | Maize | nucleus | 13.33 | 18.86 |
| EER92402 | Sorghum | nucleus | 14.51 | 18.83 |
| GSMUA_Achr9P04670_001 | Banana | cytosol | 13.63 | 18.41 |
| Os03t0298700-01 | Rice | cytosol | 14.16 | 18.34 |
| Zm00001d047701_P002 | Maize | nucleus | 13.63 | 17.86 |
| GSMUA_Achr6P32700_001 | Banana | cytosol | 15.52 | 17.77 |
| HORVU4Hr1G055030.24 | Barley | nucleus | 13.68 | 17.5 |
| TraesCS4D01G190300.1 | Wheat | nucleus | 13.51 | 17.48 |
| TraesCS4A01G115200.1 | Wheat | nucleus | 13.45 | 17.29 |
| KRH42863 | Soybean | nucleus | 12.97 | 16.4 |
| TraesCS4B01G189000.1 | Wheat | nucleus | 8.29 | 11.94 |
| KRH58965 | Soybean | nucleus | 6.81 | 11.62 |
Protein Annotations
| Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | EntrezGene:100793542 | MapMan:20.2.2.2.4 | UniProt:A0A0R0KEI4 | EMBL:ACUP02001363 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_03G041600 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0030036 | InterPro:IPR003124 | EnsemblPlants:KRH65511 | ProteinID:KRH65511 | ProteinID:KRH65511.1 |
| PFscan:PS51082 | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF12 | InterPro:SCAR/WAVE_fam | UniParc:UPI00023BC69A | InterPro:WH2_dom |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:5283969..5291986
Molecular Weight (calculated)
185019.0 Da
IEP (calculated)
4.280
GRAVY (calculated)
-0.660
Length
1688 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPLSKYCVRN EYSLADPELC RAADKDDPEA LLEAVAMAGL VGLLRQLGDL AEFAAEIFHD LHEEVMATAA RGHGLMARVK QLEAEVPSLE KAFFSQTHHS
0101: SFYSNGGIDW HPNLHSEQNL VTRGDLPRFI MDSYEECRGP PRLFLLDKFD VAGAGACLKR YTDPSFFKIE PTSSVTATIE VQREKRIRKV KLKKGARLRD
0201: GETPNAVPSH AKLHQLLLEE RIENGYSNPA RLVKLKKRQL NGPAVETRAG KSYMEKFLET PSPDHKMVCE TSIFPLPVKQ TSDDASEAGI KILEISSISP
0301: VKKSLGNKNT YSSPDEKELE LKPFSQMDGG TNGDLVKVKE QISDGVADKK SSNHLMLPDE AELAIDEQKK IEGSLDGYQS DDVTSEVDNY MDALTTMESE
0401: LETDNEFKPK SSFLNIQKAA NTNDKEEHQL QAQFSDSQSF GDSSMSDDCS SFKQDRNEEH IKVEAQLSDS QSTGTSSSLD DNSSFKRDGN GQHIELQAHL
0501: SDSQSVESSS TSDKNFKKDR SYLPHSDSLT TAVENMQSEP ILFTNTKYCE PEVEDAPSNQ LPHNVEFQRT DCERFVMHDD APVHEEDISD LGQASSDLTT
0601: SGLVLCSDLV STSPVILPSD ETPSDPAELN LRLDDDDADR TGLVESITSK PVSLSLGTDD AHPLGSSDKT SLDNLDDDDP YIHSDDLLQV PNDLELAHGD
0701: ECSDHSEIKI SQAESPNENP SKILVNRDIG SPVEDPVSPS MEELNLNSGA MLARDCQDSK DEDCTVATQL NSVARVPPVS CFTGELSSDS THNNTLNGPG
0801: SAEIEVSYSD LQSKAEEIPK MVHDDKINGS TFSANSVEGD AHFKHPSPDN HVMVNDLVTE NVQSEDQAVY SVPSVDSAEN DVGVVTCPAS SQICSPSMGL
0901: SDLEEPLLSS HSYQMEIKSN EVELTQIAMD TNAEKRKNQS APLLDVTSSD VVNSSMSNIT KLEEPLSTFA DSPKKEMEVD EAVARDSLTE LEEQKIVDQP
1001: EIASVDVQLN LNKLVPCDLP DSEICNNNQK SSPREKFQHD AFVDDAEMVP EFSGLDDRQS ESLSYGQHDP LQNGRDSFSS SSGNQLEPET DLDLLSKSQI
1101: GEQDAEFPVR DEKNFASEKS QCQQMQICQL EQESTHATSE CASEIHADEP SSFYSFPQSS SQENNAAKHV MDPLKPLLPN LFPKATENNL DEMPPMPPLP
1201: PMQWRMGKVQ HASLASQREE LEVSPASVQP IRPDKQSLFG LPTSERDALL YQNPFLPVMA VESDKLQDSS GFPVDVSGHP VAIPFQFPVM VNESKGQYNY
1301: LLLDRNQIQN PFLTLPVAST AMPPQGFFVA PEGEMIQNSN PCAPIPSAAY DVSGHNSIPP QEKPTQPPNQ LMMETSPDDK SLLQSMSNMV SMDRPPHGHA
1401: VASEGEKVLN SPTIPPAECA VSGHDSVSPQ EKLTQHPSQL LTEHSSDDKT LLQSVTNVVS MDSSDSQIVS SEGEMEQSSN PNPPSPPVEC AVPGPGHDSI
1501: SSHESLTLPP SQLMSETSSE FKTLQQSISN VEGEQGRLPI SFMSPSNMES MEPNQSFPPF EGGMSASLDT SDHTSDVESE RTNGKPKNKL PRPRNPLIDA
1601: VAAHDKSKLR KVTERVMPQI APKVDERDSL LEQIRTKSFN LKPAVTTRPS IQGPKTNLKL AAILEKANAI RQALAGSDED DDADWSDS
0101: SFYSNGGIDW HPNLHSEQNL VTRGDLPRFI MDSYEECRGP PRLFLLDKFD VAGAGACLKR YTDPSFFKIE PTSSVTATIE VQREKRIRKV KLKKGARLRD
0201: GETPNAVPSH AKLHQLLLEE RIENGYSNPA RLVKLKKRQL NGPAVETRAG KSYMEKFLET PSPDHKMVCE TSIFPLPVKQ TSDDASEAGI KILEISSISP
0301: VKKSLGNKNT YSSPDEKELE LKPFSQMDGG TNGDLVKVKE QISDGVADKK SSNHLMLPDE AELAIDEQKK IEGSLDGYQS DDVTSEVDNY MDALTTMESE
0401: LETDNEFKPK SSFLNIQKAA NTNDKEEHQL QAQFSDSQSF GDSSMSDDCS SFKQDRNEEH IKVEAQLSDS QSTGTSSSLD DNSSFKRDGN GQHIELQAHL
0501: SDSQSVESSS TSDKNFKKDR SYLPHSDSLT TAVENMQSEP ILFTNTKYCE PEVEDAPSNQ LPHNVEFQRT DCERFVMHDD APVHEEDISD LGQASSDLTT
0601: SGLVLCSDLV STSPVILPSD ETPSDPAELN LRLDDDDADR TGLVESITSK PVSLSLGTDD AHPLGSSDKT SLDNLDDDDP YIHSDDLLQV PNDLELAHGD
0701: ECSDHSEIKI SQAESPNENP SKILVNRDIG SPVEDPVSPS MEELNLNSGA MLARDCQDSK DEDCTVATQL NSVARVPPVS CFTGELSSDS THNNTLNGPG
0801: SAEIEVSYSD LQSKAEEIPK MVHDDKINGS TFSANSVEGD AHFKHPSPDN HVMVNDLVTE NVQSEDQAVY SVPSVDSAEN DVGVVTCPAS SQICSPSMGL
0901: SDLEEPLLSS HSYQMEIKSN EVELTQIAMD TNAEKRKNQS APLLDVTSSD VVNSSMSNIT KLEEPLSTFA DSPKKEMEVD EAVARDSLTE LEEQKIVDQP
1001: EIASVDVQLN LNKLVPCDLP DSEICNNNQK SSPREKFQHD AFVDDAEMVP EFSGLDDRQS ESLSYGQHDP LQNGRDSFSS SSGNQLEPET DLDLLSKSQI
1101: GEQDAEFPVR DEKNFASEKS QCQQMQICQL EQESTHATSE CASEIHADEP SSFYSFPQSS SQENNAAKHV MDPLKPLLPN LFPKATENNL DEMPPMPPLP
1201: PMQWRMGKVQ HASLASQREE LEVSPASVQP IRPDKQSLFG LPTSERDALL YQNPFLPVMA VESDKLQDSS GFPVDVSGHP VAIPFQFPVM VNESKGQYNY
1301: LLLDRNQIQN PFLTLPVAST AMPPQGFFVA PEGEMIQNSN PCAPIPSAAY DVSGHNSIPP QEKPTQPPNQ LMMETSPDDK SLLQSMSNMV SMDRPPHGHA
1401: VASEGEKVLN SPTIPPAECA VSGHDSVSPQ EKLTQHPSQL LTEHSSDDKT LLQSVTNVVS MDSSDSQIVS SEGEMEQSSN PNPPSPPVEC AVPGPGHDSI
1501: SSHESLTLPP SQLMSETSSE FKTLQQSISN VEGEQGRLPI SFMSPSNMES MEPNQSFPPF EGGMSASLDT SDHTSDVESE RTNGKPKNKL PRPRNPLIDA
1601: VAAHDKSKLR KVTERVMPQI APKVDERDSL LEQIRTKSFN LKPAVTTRPS IQGPKTNLKL AAILEKANAI RQALAGSDED DDADWSDS
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.