CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH00374
KRH40820
KRH65511
KRH76068

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45970.1	KRH00374	AT2G38440.1	17267444
AT5G45970.1	KRH40820	AT2G38440.1	17267444
AT5G45970.1	KRH65511	AT2G38440.1	17267444
AT5G45970.1	KRH76068	AT2G38440.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20356	Soybean	cytosol	97.45	89.67
KRH27004	Soybean	cytosol, nucleus, plastid	88.27	88.27
KRH25686	Soybean	cytosol	87.76	87.31
Os02t0312600-01	Rice	cytosol	87.76	87.31
Solyc02g077400.2.1	Tomato	cytosol, plastid	86.73	86.29
PGSC0003DMT400027852	Potato	cytosol	86.73	86.29
Bra025045.1-P	Field mustard	cytosol	87.76	85.57
CDY58056	Canola	cytosol	87.76	85.57
AT5G45970.1	Thale cress	cytosol	87.24	85.07
CDX77623	Canola	cytosol	87.24	85.07
CDY57346	Canola	cytosol	86.73	84.58
KRH22321	Soybean	cytosol, nucleus, plasma membrane	86.73	84.58
KRH24310	Soybean	cytosol	84.69	84.26
KRH51687	Soybean	cytosol, nucleus, plastid	84.69	84.26
KRH29287	Soybean	cytosol	84.69	84.26
KRH61024	Soybean	cytosol	84.18	84.18
Bra022004.1-P	Field mustard	cytosol	86.22	84.08
CDY67441	Canola	cytosol	85.71	84.0
KRH61026	Soybean	cytosol, nucleus, plastid	84.18	83.76
KRH28825	Soybean	cytosol	82.14	81.73
KRH76629	Soybean	cytosol	82.14	81.73
KRH08028	Soybean	cytosol	81.63	81.22
KRH54429	Soybean	cytosol	26.53	80.0
KRH69754	Soybean	cytosol	80.1	79.7
VIT_10s0003g00570.t01	Wine grape	cytosol	67.86	77.78
KRH55628	Soybean	cytosol	26.53	71.23
KRH48356	Soybean	cytosol	75.51	70.48
KRH39320	Soybean	cytosol	75.0	69.34
KRH57035	Soybean	cytosol	72.96	68.42
KRH63489	Soybean	cytosol	73.98	68.4
KRH54430	Soybean	cytosol	46.94	63.01
KRH03338	Soybean	cytosol, plastid	73.98	57.09
KRG90165	Soybean	cytosol	33.67	55.0

Protein Annotations

EntrezGene:100799091	MapMan:27.4.1	Gene3D:3.40.50.300	UniProt:A0A0R4J3N0	EMBL:ACUP02004664	EnsemblPlantsGene:GLYMA_07G203100
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	EnsemblPlants:KRH50139
ProteinID:KRH50139	ProteinID:KRH50139.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420
PANTHER:PTHR24072	PANTHER:PTHR24072:SF178	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI00019A9E7D	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:37223608..37226239

Molecular Weight (calculated)

21817.4 Da

IEP (calculated)

9.786

GRAVY (calculated)

-0.235

Length

196 amino acids

Sequence
(BLAST)

001: MSTARFIKCV TVGDGAVGKT CMLISYTSNT FPTDYVPTVF DNFSANVTVD GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FLLCYSLISK ASYENISKKW
101: IPELRHYAPN VPIVLVGTKL DLRDDKQFLI DHPGSARITT AQGEELKKMI GAVTYIECSS KTQQNVKTVF DAAIKVALRP PKPKKKPRKK KTCPFL

Best Arabidopsis Sequence Match ( AT5G45970.1 )
(BLAST)

001: MSTARFIKCV TVGDGAVGKT CMLISYTSNT FPTDYVPTVF DNFSANVVVD GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLISK ASYENIHKKW
101: LPELKHYAPG IPIVLVGTKL DLRDDKQFLK DHPGAASITT AQGEELRKMI GAVRYLECSS KTQQNVKAVF DTAIRVALRP PKAKKKIKPL KTKRSRICFF
201: L

Arabidopsis Description

ARAC2ROP7 [Source:UniProtKB/TrEMBL;Acc:A0A178UDV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.