CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27004	Soybean	cytosol, nucleus, plastid	95.02	97.45
VIT_12s0028g02630.t01	Wine grape	cytosol, nucleus, plastid	90.55	92.86
KRH25686	Soybean	cytosol	89.55	91.37
GSMUA_Achr10P...	Banana	cytosol	87.06	89.29
GSMUA_Achr6P13740_001	Banana	cytosol	85.07	87.24
KRH50139	Soybean	cytosol, nucleus, plastid	84.58	86.73
KRH24310	Soybean	cytosol	83.58	85.28
KRH29287	Soybean	cytosol	83.08	84.77
KRH51687	Soybean	cytosol, nucleus, plastid	83.08	84.77
KRH61026	Soybean	cytosol, nucleus, plastid	82.59	84.26
KRH61024	Soybean	cytosol	81.59	83.67
KRH76629	Soybean	cytosol	80.1	81.73
KRH28825	Soybean	cytosol	80.1	81.73
KRH08028	Soybean	cytosol	79.6	81.22
KRH54429	Soybean	cytosol	25.87	80.0
KRH69754	Soybean	cytosol	78.11	79.7
KRH20356	Soybean	cytosol	84.08	79.34
KRH55628	Soybean	cytosol	26.87	73.97
KRH63489	Soybean	cytosol	76.12	72.17
KRH48356	Soybean	cytosol	74.63	71.43
KRH39320	Soybean	cytosol	75.12	71.23
KRH57035	Soybean	cytosol	73.63	70.81
KRH54430	Soybean	cytosol	49.25	67.81
KRH03338	Soybean	cytosol, plastid	74.13	58.66
KRG90165	Soybean	cytosol	34.33	57.5

Protein Annotations

EntrezGene:100816833	MapMan:27.4.1	Gene3D:3.40.50.300	EMBL:ACUP02008406	EnsemblPlantsGene:GLYMA_13G293100	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	UniProt:K7M2L2	EnsemblPlants:KRH22321
ProteinID:KRH22321	ProteinID:KRH22321.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420
PANTHER:PTHR24072	PANTHER:PTHR24072:SF178	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI0002963BB6	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:39297364..39300053

Molecular Weight (calculated)

22393.1 Da

IEP (calculated)

9.517

GRAVY (calculated)

-0.105

Length

201 amino acids

Sequence
(BLAST)

001: MSTARFIKCV TVGDGAVGKT CMLISYTSNT FPTDYVPTVF DNFSANVVID GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLLSR ASYENISKKA
101: HFVQWIPELR HYAPIVPIVL VGTKLDLRED RQYLIDHPAA TPITTAQGEE LKKEIGAAVY IECSSKTQQN VKAVFDAAIK VVLQPSKPKK KRKKNRTCVF
201: L

Best Arabidopsis Sequence Match ( AT1G20090.1 )
(BLAST)

001: MASRFIKCVT VGDGAVGKTC MLISYTSNTF PTDYVPTVFD NFSANVVVDG NTVNLGLWDT AGQEDYNRLR PLSYRGADVF ILAFSLISKA SYENIAKKWI
101: PELRHYAPGV PIILVGTKLD LRDDKQFFID HPGAVPITTN QGEELKKLIG SAVYIECSSK TQQNVKAVFD AAIKVVLQPP KQKKKKKNKN RCAFL

Arabidopsis Description

ARAC4RAC-like GTP-binding protein ARAC4 [Source:UniProtKB/TrEMBL;Acc:Q0WU07]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.