CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22321	Soybean	cytosol, nucleus, plasma membrane	97.45	95.02
VIT_12s0028g02630.t01	Wine grape	cytosol, nucleus, plastid	94.9	94.9
KRH25686	Soybean	cytosol	94.39	93.91
GSMUA_Achr10P...	Banana	cytosol	90.82	90.82
GSMUA_Achr6P13740_001	Banana	cytosol	88.78	88.78
KRH50139	Soybean	cytosol, nucleus, plastid	88.27	88.27
KRH24310	Soybean	cytosol	87.24	86.8
KRH29287	Soybean	cytosol	86.73	86.29
KRH51687	Soybean	cytosol, nucleus, plastid	86.73	86.29
KRH61026	Soybean	cytosol, nucleus, plastid	86.22	85.79
KRH61024	Soybean	cytosol	85.2	85.2
KRH76629	Soybean	cytosol	83.67	83.25
KRH28825	Soybean	cytosol	83.67	83.25
KRH08028	Soybean	cytosol	83.16	82.74
KRH54429	Soybean	cytosol	27.04	81.54
KRH69754	Soybean	cytosol	81.63	81.22
KRH20356	Soybean	cytosol	87.76	80.75
KRH63489	Soybean	cytosol	79.59	73.58
KRH48356	Soybean	cytosol	78.06	72.86
KRH39320	Soybean	cytosol	78.57	72.64
KRH55628	Soybean	cytosol	27.04	72.6
KRH57035	Soybean	cytosol	77.04	72.25
KRH54430	Soybean	cytosol	51.02	68.49
KRH03338	Soybean	cytosol, plastid	77.55	59.84
KRG90165	Soybean	cytosol	36.22	59.17

Protein Annotations

EntrezGene:100794287	MapMan:27.4.1	Gene3D:3.40.50.300	EMBL:ACUP02007760	EnsemblPlantsGene:GLYMA_12G208000	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	UniProt:I1LUJ9	InterPro:IPR003578	ProteinID:KRH27002.1
ProteinID:KRH27003.1	EnsemblPlants:KRH27004	ProteinID:KRH27004	ProteinID:KRH27004.1	ProteinID:KRH27005.1	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF178	SMART:SM00173
SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho
TIGRFAMs:TIGR00231	UniParc:UPI000233C5C1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:36755851..36758723

Molecular Weight (calculated)

21722.3 Da

IEP (calculated)

9.677

GRAVY (calculated)

-0.135

Length

196 amino acids

Sequence
(BLAST)

001: MSTARFIKCV TVGDGAVGKT CMLISYTSNT FPTDYVPTVF DNFSANVVVD GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLLSR ASYENISKKW
101: IPELRHYAPT VPIVLVGTKL DLREDRQYLI DHPGATPITT AQGEELKKAI GAAVYIECSS KTQQNVKAVF DAAIKVVLQP PKPKKKRKKN RTCVFL

Best Arabidopsis Sequence Match ( AT1G20090.1 )
(BLAST)

001: MASRFIKCVT VGDGAVGKTC MLISYTSNTF PTDYVPTVFD NFSANVVVDG NTVNLGLWDT AGQEDYNRLR PLSYRGADVF ILAFSLISKA SYENIAKKWI
101: PELRHYAPGV PIILVGTKLD LRDDKQFFID HPGAVPITTN QGEELKKLIG SAVYIECSSK TQQNVKAVFD AAIKVVLQPP KQKKKKKNKN RCAFL

Arabidopsis Description

ARAC4RAC-like GTP-binding protein ARAC4 [Source:UniProtKB/TrEMBL;Acc:Q0WU07]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.