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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:nucleus
Plant-mPloc:cytosol, nucleus, plasma membrane
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG97079
KRH01997
KRH11529
KRH13046
KRH36543
KRH43411
KRH51157
KRH68821

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G20090.1 KRH13046 AT4G16340.1 17267444
AT1G20090.1 KRH43411 AT4G16340.1 17267444
AT1G20090.1 KRG97079 AT5G18410.1 15294869
AT1G20090.1 KRH68821 AT5G18410.1 15294869
AT1G75840.1 KRH01997 AT3G07880.1 10798620
AT1G75840.1 KRH11529 AT3G07880.1 10798620
AT1G75840.1 KRH36543 AT3G07880.1 10798620
AT1G75840.1 KRH51157 AT3G07880.1 10798620
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH51687 Soybean cytosol, nucleus, plastid 98.48 98.48
KRH61024 Soybean cytosol 96.95 97.45
VIT_18s0001g14670.t01 Wine grape cytosol 95.43 95.43
KRH29287 Soybean cytosol 94.92 94.92
KRH24310 Soybean cytosol 94.92 94.92
KRH76629 Soybean cytosol 93.4 93.4
KRH28825 Soybean cytosol 93.4 93.4
KRH08028 Soybean cytosol 92.39 92.39
KRH69754 Soybean cytosol 91.88 91.88
Bra003739.1-P Field mustard cytosol 90.86 91.79
CDX68116 Canola cytosol 90.86 91.79
CDX85925 Canola cytosol 90.86 91.79
CDY54338 Canola cytosol 91.37 91.37
AT1G75840.1 Thale cress cytosol 90.86 91.33
CDY62937 Canola cytosol 90.86 91.33
Bra016477.1-P Field mustard cytosol 90.86 91.33
Bra008227.1-P Field mustard cytosol 90.86 91.33
CDY39066 Canola cytosol 90.86 91.33
CDY13528 Canola cytosol 90.86 91.33
Bra015807.1-P Field mustard cytosol 90.36 90.82
CDX73206 Canola cytosol 90.36 90.82
CDX87656 Canola cytosol 90.36 90.82
AT1G20090.1 Thale cress cytosol 89.85 90.77
CDY43414 Canola cytosol 90.36 90.36
Bra012210.1-P Field mustard cytosol 90.36 90.36
Os02t0120800-01 Rice plasma membrane 90.36 90.36
Zm00001d015036_P005 Maize cytosol 90.36 90.36
EES06186 Sorghum cytosol 90.36 90.36
TraesCS6A01G070700.2 Wheat cytosol 89.85 89.85
TraesCS6B01G094700.2 Wheat cytosol 89.85 89.85
TraesCS6D01G068500.2 Wheat cytosol 89.85 89.85
CDY57592 Canola cytosol 89.34 86.27
KRH27004 Soybean cytosol, nucleus, plastid 85.79 86.22
KRH25686 Soybean cytosol 85.28 85.28
KRH50139 Soybean cytosol, nucleus, plastid 83.76 84.18
KRH22321 Soybean cytosol, nucleus, plasma membrane 84.26 82.59
KRH54429 Soybean cytosol 26.4 80.0
KRH20356 Soybean cytosol 82.74 76.53
Zm00001d053899_P001 Maize cytosol 86.29 73.28
KRH57035 Soybean cytosol 77.67 73.21
KRH48356 Soybean cytosol 77.67 72.86
KRH55628 Soybean cytosol 26.9 72.6
KRH39320 Soybean cytosol 77.67 72.17
HORVU2Hr1G076740.1 Barley cytosol 23.35 71.88
KRH63489 Soybean cytosol 77.16 71.7
KRH54430 Soybean cytosol 50.25 67.81
KRH03338 Soybean cytosol, plastid 77.16 59.84
KRG90165 Soybean cytosol 34.52 56.67
Protein Annotations
EntrezGene:100527464MapMan:27.4.1Gene3D:3.40.50.300EMBL:ACUP02002147EMBL:BT092307UniProt:C6T4E6
EnsemblPlantsGene:GLYMA_04G023400GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488
GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0007154GO:GO:0007165
GO:GO:0007264GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016787InterPro:IPR003578
EnsemblPlants:KRH61026ProteinID:KRH61026ProteinID:KRH61026.1InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449
PFscan:PS51420PANTHER:PTHR24072PANTHER:PTHR24072:SF249SMART:SM00173SMART:SM00174SMART:SM00175
SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseInterPro:Small_GTPase_RhoTIGRFAMs:TIGR00231UniParc:UPI00019A9EB1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr4:-:1840530..1843639
Molecular Weight (calculated)
21716.3 Da
IEP (calculated)
9.697
GRAVY (calculated)
-0.081
Length
197 amino acids
Sequence
(BLAST)
001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVD GSTVNLALWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENIAKKW
101: IPELRHYAPG VPIILVGTKL DLREDKQFFM DHPGAVPITT AQGEELRKLI GAPAYIECSS KTQQNVKAVF DAAIKVVLQP PKQKKKKRKA QKACSIL
Best Arabidopsis Sequence Match ( AT4G35020.3 )
(BLAST)
001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVIVD GNTINLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLVSK ASYENVSKKW
101: VPELRHYAPG VPIILVGTKL DLRDDKQFFA EHPGAVPIST AQGEELKKLI GAPAYIECSA KTQQNVKAVF DAAIKVVLQP PKNKKKKKRK SQKGCSIL
Arabidopsis Description
ARAC3At4g35020 [Source:UniProtKB/TrEMBL;Acc:Q5PNX9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.