Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plasma membrane 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68821 | Soybean | nucleus | 98.83 | 98.83 |
| Solyc11g013290.1.1 | Tomato | cytosol | 24.82 | 89.55 |
| VIT_04s0043g00740.t01 | Wine grape | cytosol | 84.73 | 85.8 |
| AT5G18410.1 | Thale cress | cytosol | 83.79 | 83.4 |
| Bra006457.1-P | Field mustard | cytosol | 83.01 | 83.27 |
| CDX70816 | Canola | cytosol | 83.4 | 82.94 |
| CDY51228 | Canola | cytosol | 83.63 | 82.53 |
| KRH33588 | Soybean | cytosol | 7.52 | 82.05 |
| Solyc11g013280.1.1 | Tomato | cytosol | 57.48 | 80.22 |
| KRH74900 | Soybean | plastid | 4.07 | 76.47 |
Protein Annotations
| EMBL:ACUP02012176 | EnsemblPlants:KRG97079 | EnsemblPlantsGene:GLYMA_19G250600 | EntrezGene:100775991 | InterPro:Cytoplasmic_FMR1-int | InterPro:DUF1394 |
| PANTHER:PTHR12195 | PANTHER:PTHR12195:SF0 | PFAM:PF05994 | PFAM:PF07159 | PIRSF:PIRSF008153 | PRINTS:PR01698 |
| ProteinID:KRG97079 | ProteinID:KRG97079.1 | SEG:seg | UniParc:UPI000233ED39 | UniProt:I1NCF6 | MapMan:20.2.2.2.1 |
Description
hypothetical protein
Coordinates
chr19:+:49646179..49668745
Molecular Weight (calculated)
144933.0 Da
IEP (calculated)
5.778
GRAVY (calculated)
-0.085
Length
1277 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAVPVEEAIA ALSTFSLEDE QPEVQGPGVW VSTERGATES PIEYSDVSAY RLSLSEDTKA LNQLNALTQE GKEMASVLYT YRSCVKALPQ LPDSMKQSQA
0101: DLYLETYQVL DLEMSRLREI QRWQASASSK LAADMQRFSR PERRINGPTI SHLWSMLKLL DVLVQLDHLK NAKASIPNDF SWYKRTFTQV SGQWQDTDSM
0201: REELDDLQIF LSTRWAILLN LHVEMFRVNN VEDILQVLIV FVVESLELDF ALLFPERHVL LRVLPVLVVL VTSSEKDSES LYKRVKINRL INIFKNEAVI
0301: PAFPDLHLSP AAIVKELSTY FPKFSSQTRL LTLPAPHELP PREAQEYQRH YLIINHIGAI RAEHDDFVIR FASAMNQLLL LKSTDGSDVE WSKEVKGNMY
0401: DMIVEGFQLL SRWTARIWEQ CAWKFSRPCK DASPSFSDYE KVVRYNYSAE ERKALVELVS YIKSVGSMMQ RCDTLVADAL WETIHSEVQD FVQNTLATML
0501: RTTFRKKKDL SRILSDMRTL SADWMANTNK SESELQSSQH GGEESKANIF YPRAVAPTAA QVHCLQFLIY EVVSGGNLRR PGGLFGNSGS EIPVNDLKQL
0601: ETFFYKLGFF LHILDYSATV ATLTDLGFLW FREFYLESSR VIQFPIECSL PWMLVDCVLE SPNSGLLESV LMPFDIYNDS AQQALVLLKQ RFLYDEIEAE
0701: VDHCFDIFVT KLCETIFTYY KSWAACELLD PSFLFASDNA EKYAVQPIRL NMLLKMTRVK LLGRMINLRS LITERMNKVF RENIEFLFDR FECQDLCAIV
0801: ELEKLLDVLK HSHELLSRDL SVDSFSLMLN EMQENISLVS FSSRLASQIW SEMHSDFLPN FILCNTTQRF IRSSRTVPVQ KPSVPSSKPS FYCGTQDLNS
0901: AHQSFARLHS GFFGTPHMFS IVRLLGSRSL PWLIRALLDH ISNKITLLEP MITGLQDSLP KSIGLLPFDG GVTGCVRLVK EHLNWETKSE LKAEVLHGIK
1001: EIGSVLYWMG LLDIVLREKD SMDFMQTAPW LGLLPGADGQ IVTSQDGGDS PVVSLFKSTA AAMVSYPGCP SPTSFHIMSK QAEAADLLYK ANLNTGSVLE
1101: YALAFASAAL DKYCNKWSAA PKTGFIDITI SKDFYRIYSG LQIGYLEESA QVPSNSHERL GDSIAWGGCT IIYLLGQQLH FELFDFSYQI LNIAEVEAAS
1201: VMQTHKNSQF AVQGWEALLE AMKKARRLNN HVFSMLKARC PLEEKTACAI KQSGAPIHRI KFDNTVSAFE TLPQKGS
0101: DLYLETYQVL DLEMSRLREI QRWQASASSK LAADMQRFSR PERRINGPTI SHLWSMLKLL DVLVQLDHLK NAKASIPNDF SWYKRTFTQV SGQWQDTDSM
0201: REELDDLQIF LSTRWAILLN LHVEMFRVNN VEDILQVLIV FVVESLELDF ALLFPERHVL LRVLPVLVVL VTSSEKDSES LYKRVKINRL INIFKNEAVI
0301: PAFPDLHLSP AAIVKELSTY FPKFSSQTRL LTLPAPHELP PREAQEYQRH YLIINHIGAI RAEHDDFVIR FASAMNQLLL LKSTDGSDVE WSKEVKGNMY
0401: DMIVEGFQLL SRWTARIWEQ CAWKFSRPCK DASPSFSDYE KVVRYNYSAE ERKALVELVS YIKSVGSMMQ RCDTLVADAL WETIHSEVQD FVQNTLATML
0501: RTTFRKKKDL SRILSDMRTL SADWMANTNK SESELQSSQH GGEESKANIF YPRAVAPTAA QVHCLQFLIY EVVSGGNLRR PGGLFGNSGS EIPVNDLKQL
0601: ETFFYKLGFF LHILDYSATV ATLTDLGFLW FREFYLESSR VIQFPIECSL PWMLVDCVLE SPNSGLLESV LMPFDIYNDS AQQALVLLKQ RFLYDEIEAE
0701: VDHCFDIFVT KLCETIFTYY KSWAACELLD PSFLFASDNA EKYAVQPIRL NMLLKMTRVK LLGRMINLRS LITERMNKVF RENIEFLFDR FECQDLCAIV
0801: ELEKLLDVLK HSHELLSRDL SVDSFSLMLN EMQENISLVS FSSRLASQIW SEMHSDFLPN FILCNTTQRF IRSSRTVPVQ KPSVPSSKPS FYCGTQDLNS
0901: AHQSFARLHS GFFGTPHMFS IVRLLGSRSL PWLIRALLDH ISNKITLLEP MITGLQDSLP KSIGLLPFDG GVTGCVRLVK EHLNWETKSE LKAEVLHGIK
1001: EIGSVLYWMG LLDIVLREKD SMDFMQTAPW LGLLPGADGQ IVTSQDGGDS PVVSLFKSTA AAMVSYPGCP SPTSFHIMSK QAEAADLLYK ANLNTGSVLE
1101: YALAFASAAL DKYCNKWSAA PKTGFIDITI SKDFYRIYSG LQIGYLEESA QVPSNSHERL GDSIAWGGCT IIYLLGQQLH FELFDFSYQI LNIAEVEAAS
1201: VMQTHKNSQF AVQGWEALLE AMKKARRLNN HVFSMLKARC PLEEKTACAI KQSGAPIHRI KFDNTVSAFE TLPQKGS
0001: MAVPVEEAIA ALSTFSLEDE QPEVQGPAVM VSAERAATDS PIEYSDVAAY RLSLSEDTKA LNQLNTLIQE GKEMASILYT YRSCVKALPQ LPESMKHSQA
0101: DLYLETYQVL DLEMSRLREI QRWQSSASAK LAADMQRFSR PERRINGPTV THLWSMLKLL DVLVQLDHLK NAKASIPNDF SWYKRTFTQV SAQWQDTDTM
0201: REELDDLQIF LSTRWAILLN LHVEMFRVNN VEDILQVLIV FIVESLELDF ALLFPERYIL LRVLPVLVVL ATPSEKDTEA LYKRVKLNRL INIFKNDPVI
0301: PAFPDLHLSP AAILKELSVY FQKFSSQTRL LTLPAPHELP PREALEYQRH YLIVNHIGAL RAEHDDFTIR FASSMNQLLL LKSNDGAYTE WCREVKGNMY
0401: DMVVEGFQLL SRWTARIWEQ CAWKFSRPCR DAGETPEASG SYSDYEKVVR FNYTAEERKA LVELVGYIKS VGSMLQRCDT LVADALWETI HAEVQDFVQN
0501: TLATMLRTTF RKKKDLSRIL SDMRTLSADW MANTRPEHEM PSSQHGNDES RGNFFYPRPV APTAAQVHCL QFLIYEVVSG GNLRRPGGFF GNNGSEIPVN
0601: DLKQLETFFY KLSFFLHILD YSASIGILTD LGFLWFREFY LESSRVIQFP IECSLPWMLI DYILEAQNSG LLESVLLPFD IYNDSAQQAL VVLRQRFLYD
0701: EIEAEVDHGF DIFVSRLSES IFTYYKSWSA SELLDPSFLF ALDNGEKFSI QPVRFTALFK MTKVKILGRT INLRSLIAQR MNRIFRENLE FLFDRFESQD
0801: LCAVVELEKL IDILKHSHEL LSQDLSIDPF SLMLNEMQEN ISLVSFSSRL ATQIWSEMQS DFLPNFILCN TTQRFVRSSK VPPTQKPSVP SAKPSFYCGT
0901: QDLNAAHQSF ARLHSGFFGI PHLFSIVKLL GSRSLPWLIR ALLDHISNKI TTLEPMISGL QEALPKSIGL LSFDGGVTGC MKLIREQLNW GTKSELKSEV
1001: LRGIKEIGSV IYTMGLLDIV LREVDTKRFM QTAPWLGLIP GAEGQIVNAQ DGESPLVNLL KSATSAVVSS PGCLNPAAFY TMSKQAEAAD LLYKANMNGG
1101: SVLEYTLAFT SASLDKYCSK WSAPPKTGFV DITTSKDFYR IYGGLQIGYL EEITAPQSAQ HEVLGDSIAW GGCTIIYLLG QQLHFELFDF SYQVLNVSEV
1201: ETVSASHTHR NPQIHQGWEG LLEGMKKARR LNNHVFSMLK ARCPLEDKTA CAIKQSGAPL PRVRFENTVS AFETLPQKGT VG
0101: DLYLETYQVL DLEMSRLREI QRWQSSASAK LAADMQRFSR PERRINGPTV THLWSMLKLL DVLVQLDHLK NAKASIPNDF SWYKRTFTQV SAQWQDTDTM
0201: REELDDLQIF LSTRWAILLN LHVEMFRVNN VEDILQVLIV FIVESLELDF ALLFPERYIL LRVLPVLVVL ATPSEKDTEA LYKRVKLNRL INIFKNDPVI
0301: PAFPDLHLSP AAILKELSVY FQKFSSQTRL LTLPAPHELP PREALEYQRH YLIVNHIGAL RAEHDDFTIR FASSMNQLLL LKSNDGAYTE WCREVKGNMY
0401: DMVVEGFQLL SRWTARIWEQ CAWKFSRPCR DAGETPEASG SYSDYEKVVR FNYTAEERKA LVELVGYIKS VGSMLQRCDT LVADALWETI HAEVQDFVQN
0501: TLATMLRTTF RKKKDLSRIL SDMRTLSADW MANTRPEHEM PSSQHGNDES RGNFFYPRPV APTAAQVHCL QFLIYEVVSG GNLRRPGGFF GNNGSEIPVN
0601: DLKQLETFFY KLSFFLHILD YSASIGILTD LGFLWFREFY LESSRVIQFP IECSLPWMLI DYILEAQNSG LLESVLLPFD IYNDSAQQAL VVLRQRFLYD
0701: EIEAEVDHGF DIFVSRLSES IFTYYKSWSA SELLDPSFLF ALDNGEKFSI QPVRFTALFK MTKVKILGRT INLRSLIAQR MNRIFRENLE FLFDRFESQD
0801: LCAVVELEKL IDILKHSHEL LSQDLSIDPF SLMLNEMQEN ISLVSFSSRL ATQIWSEMQS DFLPNFILCN TTQRFVRSSK VPPTQKPSVP SAKPSFYCGT
0901: QDLNAAHQSF ARLHSGFFGI PHLFSIVKLL GSRSLPWLIR ALLDHISNKI TTLEPMISGL QEALPKSIGL LSFDGGVTGC MKLIREQLNW GTKSELKSEV
1001: LRGIKEIGSV IYTMGLLDIV LREVDTKRFM QTAPWLGLIP GAEGQIVNAQ DGESPLVNLL KSATSAVVSS PGCLNPAAFY TMSKQAEAAD LLYKANMNGG
1101: SVLEYTLAFT SASLDKYCSK WSAPPKTGFV DITTSKDFYR IYGGLQIGYL EEITAPQSAQ HEVLGDSIAW GGCTIIYLLG QQLHFELFDF SYQVLNVSEV
1201: ETVSASHTHR NPQIHQGWEG LLEGMKKARR LNNHVFSMLK ARCPLEDKTA CAIKQSGAPL PRVRFENTVS AFETLPQKGT VG
Arabidopsis Description
PIRtranscription activators [Source:TAIR;Acc:AT5G18410]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.