Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006457.1-P | Field mustard | cytosol | 97.99 | 99.61 |
| CDX70816 | Canola | cytosol | 98.53 | 99.3 |
| AT5G18410.1 | Thale cress | cytosol | 96.68 | 97.51 |
| CDX70818 | Canola | cytosol | 7.34 | 90.48 |
| Solyc11g013290.1.1 | Tomato | cytosol | 24.03 | 87.85 |
| KRG97079 | Soybean | nucleus | 82.53 | 83.63 |
| KRH68821 | Soybean | nucleus | 82.53 | 83.63 |
| VIT_04s0043g00740.t01 | Wine grape | cytosol | 80.68 | 82.79 |
| Solyc11g013280.1.1 | Tomato | cytosol | 55.02 | 77.81 |
| Os03t0143800-01 | Rice | cytosol | 73.03 | 73.48 |
| OQU93249 | Sorghum | cytosol | 72.49 | 73.0 |
| Zm00001d027633_P011 | Maize | mitochondrion | 58.66 | 72.91 |
| TraesCS4D01G306200.4 | Wheat | plastid | 72.41 | 72.58 |
| TraesCS4A01G408900.2 | Wheat | cytosol | 72.33 | 72.5 |
| TraesCS4B01G308000.2 | Wheat | cytosol | 72.33 | 72.5 |
| HORVU4Hr1G078840.3 | Barley | plastid | 72.33 | 68.52 |
| GSMUA_Achr4P00570_001 | Banana | endoplasmic reticulum, plasma membrane | 38.1 | 67.26 |
| Os03t0143900-00 | Rice | extracellular | 4.1 | 19.27 |
Protein Annotations
| EnsemblPlants:CDY51228 | EnsemblPlantsGene:GSBRNA2T00002988001 | InterPro:Cytoplasmic_FMR1-int | InterPro:DUF1394 | PANTHER:PTHR12195 | PANTHER:PTHR12195:SF0 |
| PFAM:PF05994 | PFAM:PF07159 | PIRSF:PIRSF008153 | PRINTS:PR01698 | ProteinID:CDY51228 | ProteinID:CDY51228.1 |
| SEG:seg | UniParc:UPI0004EDD925 | UniProt:A0A078IQ44 | MapMan:20.2.2.2.1 | : | : |
Description
BnaA03g07100DBnaA03g07100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQ44]
Coordinates
chrLK032977:+:17449..24939
Molecular Weight (calculated)
146938.0 Da
IEP (calculated)
5.741
GRAVY (calculated)
-0.081
Length
1294 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAVPVEEAIA ALSTFSLEDE QPEVQGPAVM VSAERAATDS PIEYSDVAAY RLSLSEDTKA LNQLNTLIQE GREMASILYT YRSCVKALPQ LPESMKHSQA
0101: DLYLETYQVL DLEMSRLREI QRWQSSASAK LAADMQRFSR PERRINGPTV THLWSMLKLL DVLVQLDHLK NAKASIPNDF SWYKRTFTQV SAQWQDTDTM
0201: REELDDLQVL AWLIFLSTRW AILLNLHVEM FRVNNVEDIL QVLIVFIVES LELDFALLFP ERYILLRVLP VLVVLATPSE KDTEALYKRV KLNRMINIFK
0301: NDPVIPAFPD LHLSPAAILK ELSVYFQKFS SQTRLLTLPA PHELPPREAL EYPFTFSYCY RHYLIVNHIG ALRAEHDDFT IRFASSMNQL LLLKSNDGAY
0401: TEWCREVKGN MYDMVVEGFQ LLSRWTARIW EQSAWKFSRP CRDAAETQEA SGSYSDYEKV VRYNYTAEER RALVELVGYI KSVGSMLQRC DTLVADALWE
0501: TIHAEVQDFV QNTLATMLRT TFRKKKDLSR ILSDMRTLSA DWMANTRPEH EMPSSQHGGD ESKANFFYPR PVAPTAAQVH CLQFLIYEVV SGGNLRRPGG
0601: FFGNNGSEIP VNDLKQLETF FYKLSFFLHI LDYSASIGIL TDLGFLWFRE FYLESSRVIQ FPIECSLPWM LIDHILEAPN SGFLESVLLP FDIYNDSAQQ
0701: ALVVLRQRFL YDEIEAEVDH GFDIFVSRLS ESIFTYYKSW SASELLDPSF LFALDNGEKF SIQPVRFTAL FKMTKVKILG RTINLRSLIA QRMNKTFREN
0801: LEFLFDRFES QDLCAVVELE KLIDILKHSH ELLSQDLTID PFSLMLNEMQ ENISLVSFSS RLATQIWSEM QSDFLPNFIL CNTTQRFVRS SKVPPTQKPS
0901: VPSAKPSFYC GTQDLNAAHQ SFARLHSGFF GIPHLFSIVK LLGSRSLPWL IRALLDHISN KITTLEPMIS GLQEALPKSI GLLSFDGGVA GCMRLIREQL
1001: NWGTKAELKT EVLRGIKEIG SVIYTMGLLD IVLREVDTKR FMQTAPWLGL IPGAEGQIVN AQEGESPLVN LLKSATSAVV SSPGCLNPAA FYTMSKQAEA
1101: ADLLYKANMN GGSVLEYTLA FTSASLDKYC SKWSAPPKTG FVDITTSKDF YRIYGGLQIG YLEEITVLQS GQQEVLGDSI AWGGCTIIYL LGQQLHFELF
1201: DFSYQVLNVS EVETVSASHT HRNPQVLQGW EGLLEGMKKA RRLNNHVFSM LKARCPLEDK TACAIKQSGA PLPRVRFENT VSAFESLPQK GTVG
0101: DLYLETYQVL DLEMSRLREI QRWQSSASAK LAADMQRFSR PERRINGPTV THLWSMLKLL DVLVQLDHLK NAKASIPNDF SWYKRTFTQV SAQWQDTDTM
0201: REELDDLQVL AWLIFLSTRW AILLNLHVEM FRVNNVEDIL QVLIVFIVES LELDFALLFP ERYILLRVLP VLVVLATPSE KDTEALYKRV KLNRMINIFK
0301: NDPVIPAFPD LHLSPAAILK ELSVYFQKFS SQTRLLTLPA PHELPPREAL EYPFTFSYCY RHYLIVNHIG ALRAEHDDFT IRFASSMNQL LLLKSNDGAY
0401: TEWCREVKGN MYDMVVEGFQ LLSRWTARIW EQSAWKFSRP CRDAAETQEA SGSYSDYEKV VRYNYTAEER RALVELVGYI KSVGSMLQRC DTLVADALWE
0501: TIHAEVQDFV QNTLATMLRT TFRKKKDLSR ILSDMRTLSA DWMANTRPEH EMPSSQHGGD ESKANFFYPR PVAPTAAQVH CLQFLIYEVV SGGNLRRPGG
0601: FFGNNGSEIP VNDLKQLETF FYKLSFFLHI LDYSASIGIL TDLGFLWFRE FYLESSRVIQ FPIECSLPWM LIDHILEAPN SGFLESVLLP FDIYNDSAQQ
0701: ALVVLRQRFL YDEIEAEVDH GFDIFVSRLS ESIFTYYKSW SASELLDPSF LFALDNGEKF SIQPVRFTAL FKMTKVKILG RTINLRSLIA QRMNKTFREN
0801: LEFLFDRFES QDLCAVVELE KLIDILKHSH ELLSQDLTID PFSLMLNEMQ ENISLVSFSS RLATQIWSEM QSDFLPNFIL CNTTQRFVRS SKVPPTQKPS
0901: VPSAKPSFYC GTQDLNAAHQ SFARLHSGFF GIPHLFSIVK LLGSRSLPWL IRALLDHISN KITTLEPMIS GLQEALPKSI GLLSFDGGVA GCMRLIREQL
1001: NWGTKAELKT EVLRGIKEIG SVIYTMGLLD IVLREVDTKR FMQTAPWLGL IPGAEGQIVN AQEGESPLVN LLKSATSAVV SSPGCLNPAA FYTMSKQAEA
1101: ADLLYKANMN GGSVLEYTLA FTSASLDKYC SKWSAPPKTG FVDITTSKDF YRIYGGLQIG YLEEITVLQS GQQEVLGDSI AWGGCTIIYL LGQQLHFELF
1201: DFSYQVLNVS EVETVSASHT HRNPQVLQGW EGLLEGMKKA RRLNNHVFSM LKARCPLEDK TACAIKQSGA PLPRVRFENT VSAFESLPQK GTVG
0001: MAVPVEEAIA ALSTFSLEDE QPEVQGPAVM VSAERAATDS PIEYSDVAAY RLSLSEDTKA LNQLNTLIQE GKEMASILYT YRSCVKALPQ LPESMKHSQA
0101: DLYLETYQVL DLEMSRLREI QRWQSSASAK LAADMQRFSR PERRINGPTV THLWSMLKLL DVLVQLDHLK NAKASIPNDF SWYKRTFTQV SAQWQDTDTM
0201: REELDDLQIF LSTRWAILLN LHVEMFRVNN VEDILQVLIV FIVESLELDF ALLFPERYIL LRVLPVLVVL ATPSEKDTEA LYKRVKLNRL INIFKNDPVI
0301: PAFPDLHLSP AAILKELSVY FQKFSSQTRL LTLPAPHELP PREALEYQRH YLIVNHIGAL RAEHDDFTIR FASSMNQLLL LKSNDGAYTE WCREVKGNMY
0401: DMVVEGFQLL SRWTARIWEQ CAWKFSRPCR DAGETPEASG SYSDYEKVVR FNYTAEERKA LVELVGYIKS VGSMLQRCDT LVADALWETI HAEVQDFVQN
0501: TLATMLRTTF RKKKDLSRIL SDMRTLSADW MANTRPEHEM PSSQHGNDES RGNFFYPRPV APTAAQVHCL QFLIYEVVSG GNLRRPGGFF GNNGSEIPVN
0601: DLKQLETFFY KLSFFLHILD YSASIGILTD LGFLWFREFY LESSRVIQFP IECSLPWMLI DYILEAQNSG LLESVLLPFD IYNDSAQQAL VVLRQRFLYD
0701: EIEAEVDHGF DIFVSRLSES IFTYYKSWSA SELLDPSFLF ALDNGEKFSI QPVRFTALFK MTKVKILGRT INLRSLIAQR MNRIFRENLE FLFDRFESQD
0801: LCAVVELEKL IDILKHSHEL LSQDLSIDPF SLMLNEMQEN ISLVSFSSRL ATQIWSEMQS DFLPNFILCN TTQRFVRSSK VPPTQKPSVP SAKPSFYCGT
0901: QDLNAAHQSF ARLHSGFFGI PHLFSIVKLL GSRSLPWLIR ALLDHISNKI TTLEPMISGL QEALPKSIGL LSFDGGVTGC MKLIREQLNW GTKSELKSEV
1001: LRGIKEIGSV IYTMGLLDIV LREVDTKRFM QTAPWLGLIP GAEGQIVNAQ DGESPLVNLL KSATSAVVSS PGCLNPAAFY TMSKQAEAAD LLYKANMNGG
1101: SVLEYTLAFT SASLDKYCSK WSAPPKTGFV DITTSKDFYR IYGGLQIGYL EEITAPQSAQ HEVLGDSIAW GGCTIIYLLG QQLHFELFDF SYQVLNVSEV
1201: ETVSASHTHR NPQIHQGWEG LLEGMKKARR LNNHVFSMLK ARCPLEDKTA CAIKQSGAPL PRVRFENTVS AFETLPQKGT VG
0101: DLYLETYQVL DLEMSRLREI QRWQSSASAK LAADMQRFSR PERRINGPTV THLWSMLKLL DVLVQLDHLK NAKASIPNDF SWYKRTFTQV SAQWQDTDTM
0201: REELDDLQIF LSTRWAILLN LHVEMFRVNN VEDILQVLIV FIVESLELDF ALLFPERYIL LRVLPVLVVL ATPSEKDTEA LYKRVKLNRL INIFKNDPVI
0301: PAFPDLHLSP AAILKELSVY FQKFSSQTRL LTLPAPHELP PREALEYQRH YLIVNHIGAL RAEHDDFTIR FASSMNQLLL LKSNDGAYTE WCREVKGNMY
0401: DMVVEGFQLL SRWTARIWEQ CAWKFSRPCR DAGETPEASG SYSDYEKVVR FNYTAEERKA LVELVGYIKS VGSMLQRCDT LVADALWETI HAEVQDFVQN
0501: TLATMLRTTF RKKKDLSRIL SDMRTLSADW MANTRPEHEM PSSQHGNDES RGNFFYPRPV APTAAQVHCL QFLIYEVVSG GNLRRPGGFF GNNGSEIPVN
0601: DLKQLETFFY KLSFFLHILD YSASIGILTD LGFLWFREFY LESSRVIQFP IECSLPWMLI DYILEAQNSG LLESVLLPFD IYNDSAQQAL VVLRQRFLYD
0701: EIEAEVDHGF DIFVSRLSES IFTYYKSWSA SELLDPSFLF ALDNGEKFSI QPVRFTALFK MTKVKILGRT INLRSLIAQR MNRIFRENLE FLFDRFESQD
0801: LCAVVELEKL IDILKHSHEL LSQDLSIDPF SLMLNEMQEN ISLVSFSSRL ATQIWSEMQS DFLPNFILCN TTQRFVRSSK VPPTQKPSVP SAKPSFYCGT
0901: QDLNAAHQSF ARLHSGFFGI PHLFSIVKLL GSRSLPWLIR ALLDHISNKI TTLEPMISGL QEALPKSIGL LSFDGGVTGC MKLIREQLNW GTKSELKSEV
1001: LRGIKEIGSV IYTMGLLDIV LREVDTKRFM QTAPWLGLIP GAEGQIVNAQ DGESPLVNLL KSATSAVVSS PGCLNPAAFY TMSKQAEAAD LLYKANMNGG
1101: SVLEYTLAFT SASLDKYCSK WSAPPKTGFV DITTSKDFYR IYGGLQIGYL EEITAPQSAQ HEVLGDSIAW GGCTIIYLLG QQLHFELFDF SYQVLNVSEV
1201: ETVSASHTHR NPQIHQGWEG LLEGMKKARR LNNHVFSMLK ARCPLEDKTA CAIKQSGAPL PRVRFENTVS AFETLPQKGT VG
Arabidopsis Description
PIRtranscription activators [Source:TAIR;Acc:AT5G18410]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.