Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G18410.1 | EES06186 | AT1G20090.1 | 15294869 |
| AT5G18410.1 | KXG22838 | AT2G35110.1 | 15294869 |
| AT5G18410.1 | KXG22838 | AT2G35110.1 | 15296760 |
| AT5G18410.1 | KXG22838 | AT2G35110.1 | 17267444 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027633_P011 | Maize | mitochondrion | 78.13 | 96.45 |
| Os03t0143800-01 | Rice | cytosol | 94.63 | 94.56 |
| TraesCS4D01G306200.4 | Wheat | plastid | 94.32 | 93.88 |
| TraesCS4B01G308000.2 | Wheat | cytosol | 94.16 | 93.73 |
| TraesCS4A01G408900.2 | Wheat | cytosol | 94.09 | 93.65 |
| HORVU4Hr1G078840.3 | Barley | plastid | 94.16 | 88.58 |
| Solyc11g013290.1.1 | Tomato | cytosol | 23.58 | 85.59 |
| CDX70818 | Canola | cytosol | 6.69 | 81.9 |
| VIT_04s0043g00740.t01 | Wine grape | cytosol | 72.68 | 74.07 |
| Bra006457.1-P | Field mustard | cytosol | 72.61 | 73.29 |
| AT5G18410.1 | Thale cress | cytosol | 73.15 | 73.27 |
| CDX70816 | Canola | cytosol | 72.68 | 72.74 |
| CDY51228 | Canola | cytosol | 73.0 | 72.49 |
| Solyc11g013280.1.1 | Tomato | cytosol | 49.49 | 69.51 |
| GSMUA_Achr4P00580_001 | Banana | cytosol, extracellular, mitochondrion, nucleus | 14.71 | 68.73 |
| KRH33588 | Soybean | cytosol | 5.21 | 57.27 |
Protein Annotations
| EnsemblPlants:OQU93249 | EnsemblPlantsGene:SORBI_3001G507200 | InterPro:Cytoplasmic_FMR1-int | InterPro:DUF1394 | PANTHER:PTHR12195 | PANTHER:PTHR12195:SF0 |
| PFAM:PF05994 | PFAM:PF07159 | PIRSF:PIRSF008153 | PRINTS:PR01698 | ProteinID:OQU93249 | ProteinID:OQU93249.1 |
| SEG:seg | UniParc:UPI000B42622D | UniProt:A0A1Z5SBL9 | MapMan:20.2.2.2.1 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:77490755..77510956
Molecular Weight (calculated)
146689.0 Da
IEP (calculated)
5.798
GRAVY (calculated)
-0.147
Length
1285 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAIPVEEAIA ALSTFSLEDE QPDVQGLAVL LSSERYATNS PIEYSDVAAY RLSLGEDTKA INQLNTLIQE GKEMASLLYT YRSCVKALPQ LPDSMKHNQA
0101: DLYLETYQVL DLEMSRLREI QRWQASAASK LAADMQRFSR PERLVNGPTI THFWSMLKLL DVLLQLDHLK NAKASIPNDF SWYKRTFTQV STQWQDTDTM
0201: REELDDLQIF LSTRWAILLN LHAEMFRTNT VEDILQVLIV FCVESLELDF ALLFPERHTL LRVLPVLVVL ATSSEKESES LYKRVKINRL LNVFKNDPVI
0301: PAFPDLHLSP AAILKELSSY FQNFSSQTRL LNLQAPHEIQ GRELQDYQRH YLILNHMGTI RAEHDDFSIR FASAMDQMIR LKSSDGVDND WSRDIKGNMY
0401: DIVVEGFQLL SRWTGRIWEQ CAWKFSRPIS DSQQNSTTCF DYEKVVRYNY TAEERRALLE LIGYIKSIGL MMQHCDTLVS EALWETIHME VQDFVQDKLD
0501: TMLRTTFRKK KDLSRILSDM RTLSADWMAN TSKADPEQHS LHQETEEMRQ NTFYPRPVAP TAAQIHCLQF LICELVSGGN LRKPGGLFGN SGSGIPVEDL
0601: KQLETFFYKL SFFLHILDYT ATIGTLTDLG FLWFREFYLE SSRVIQFPIE CSLPWMLVDH VIESQDAGLL ESILIPFDLY NDSAQHALTS LKQRFLYDEI
0701: EAEVDLCFDL LAQKLNEIIF TYYKSCAAST LLDSSFTYAC DDGEKYFVKP LRFDAIFKLR RVMVLGRTID LRSIITQRMN KIFRENIDFL LERFENGDLC
0801: GVVELQQLLD ILELTHQSVS RFLELDSYSL MLSEMQENLS LVSYSSRISS QIWSEMQTDF LPNFILCNTT QRFVRSIKGT HHSSHRSSAS TGKPYFYCGS
0901: HDLTMAYQGL AGLYRDFFGV PHMFAVVKLL GSRSLPAIIR ALLDHISSKI TGLVPKINAL QEALPKSIGL LSFDGGIAGC QKIVHEILTW EAKSEVKTEV
1001: LHDLKEIGSA LYWMSILDIV LRQIDTTQFM QSAPWLGLVP GNDGQVKHAY SDNTPFTTLL SAATNAVTSS PACPNPSMFL VMSKQAEAAS LLYKSNLNSG
1101: SVLEYALAFT SAALDRHYSK WSATPKTGFI DITTSKDFYR IFSGLQYSYL EDSINNPSKK QEMLGDSVAW AGCTIMYLLG QQQHFELFDF SYQFLNVAEV
1201: ESATVSHYQS SERTKSSNFL QGYEGILEAM RKARRLNNHV FSMLRARCPL EDKVACAIKP SGAPLHRMKF MNTVSAFETL PQRAT
0101: DLYLETYQVL DLEMSRLREI QRWQASAASK LAADMQRFSR PERLVNGPTI THFWSMLKLL DVLLQLDHLK NAKASIPNDF SWYKRTFTQV STQWQDTDTM
0201: REELDDLQIF LSTRWAILLN LHAEMFRTNT VEDILQVLIV FCVESLELDF ALLFPERHTL LRVLPVLVVL ATSSEKESES LYKRVKINRL LNVFKNDPVI
0301: PAFPDLHLSP AAILKELSSY FQNFSSQTRL LNLQAPHEIQ GRELQDYQRH YLILNHMGTI RAEHDDFSIR FASAMDQMIR LKSSDGVDND WSRDIKGNMY
0401: DIVVEGFQLL SRWTGRIWEQ CAWKFSRPIS DSQQNSTTCF DYEKVVRYNY TAEERRALLE LIGYIKSIGL MMQHCDTLVS EALWETIHME VQDFVQDKLD
0501: TMLRTTFRKK KDLSRILSDM RTLSADWMAN TSKADPEQHS LHQETEEMRQ NTFYPRPVAP TAAQIHCLQF LICELVSGGN LRKPGGLFGN SGSGIPVEDL
0601: KQLETFFYKL SFFLHILDYT ATIGTLTDLG FLWFREFYLE SSRVIQFPIE CSLPWMLVDH VIESQDAGLL ESILIPFDLY NDSAQHALTS LKQRFLYDEI
0701: EAEVDLCFDL LAQKLNEIIF TYYKSCAAST LLDSSFTYAC DDGEKYFVKP LRFDAIFKLR RVMVLGRTID LRSIITQRMN KIFRENIDFL LERFENGDLC
0801: GVVELQQLLD ILELTHQSVS RFLELDSYSL MLSEMQENLS LVSYSSRISS QIWSEMQTDF LPNFILCNTT QRFVRSIKGT HHSSHRSSAS TGKPYFYCGS
0901: HDLTMAYQGL AGLYRDFFGV PHMFAVVKLL GSRSLPAIIR ALLDHISSKI TGLVPKINAL QEALPKSIGL LSFDGGIAGC QKIVHEILTW EAKSEVKTEV
1001: LHDLKEIGSA LYWMSILDIV LRQIDTTQFM QSAPWLGLVP GNDGQVKHAY SDNTPFTTLL SAATNAVTSS PACPNPSMFL VMSKQAEAAS LLYKSNLNSG
1101: SVLEYALAFT SAALDRHYSK WSATPKTGFI DITTSKDFYR IFSGLQYSYL EDSINNPSKK QEMLGDSVAW AGCTIMYLLG QQQHFELFDF SYQFLNVAEV
1201: ESATVSHYQS SERTKSSNFL QGYEGILEAM RKARRLNNHV FSMLRARCPL EDKVACAIKP SGAPLHRMKF MNTVSAFETL PQRAT
0001: MAVPVEEAIA ALSTFSLEDE QPEVQGPAVM VSAERAATDS PIEYSDVAAY RLSLSEDTKA LNQLNTLIQE GKEMASILYT YRSCVKALPQ LPESMKHSQA
0101: DLYLETYQVL DLEMSRLREI QRWQSSASAK LAADMQRFSR PERRINGPTV THLWSMLKLL DVLVQLDHLK NAKASIPNDF SWYKRTFTQV SAQWQDTDTM
0201: REELDDLQIF LSTRWAILLN LHVEMFRVNN VEDILQVLIV FIVESLELDF ALLFPERYIL LRVLPVLVVL ATPSEKDTEA LYKRVKLNRL INIFKNDPVI
0301: PAFPDLHLSP AAILKELSVY FQKFSSQTRL LTLPAPHELP PREALEYQRH YLIVNHIGAL RAEHDDFTIR FASSMNQLLL LKSNDGAYTE WCREVKGNMY
0401: DMVVEGFQLL SRWTARIWEQ CAWKFSRPCR DAGETPEASG SYSDYEKVVR FNYTAEERKA LVELVGYIKS VGSMLQRCDT LVADALWETI HAEVQDFVQN
0501: TLATMLRTTF RKKKDLSRIL SDMRTLSADW MANTRPEHEM PSSQHGNDES RGNFFYPRPV APTAAQVHCL QFLIYEVVSG GNLRRPGGFF GNNGSEIPVN
0601: DLKQLETFFY KLSFFLHILD YSASIGILTD LGFLWFREFY LESSRVIQFP IECSLPWMLI DYILEAQNSG LLESVLLPFD IYNDSAQQAL VVLRQRFLYD
0701: EIEAEVDHGF DIFVSRLSES IFTYYKSWSA SELLDPSFLF ALDNGEKFSI QPVRFTALFK MTKVKILGRT INLRSLIAQR MNRIFRENLE FLFDRFESQD
0801: LCAVVELEKL IDILKHSHEL LSQDLSIDPF SLMLNEMQEN ISLVSFSSRL ATQIWSEMQS DFLPNFILCN TTQRFVRSSK VPPTQKPSVP SAKPSFYCGT
0901: QDLNAAHQSF ARLHSGFFGI PHLFSIVKLL GSRSLPWLIR ALLDHISNKI TTLEPMISGL QEALPKSIGL LSFDGGVTGC MKLIREQLNW GTKSELKSEV
1001: LRGIKEIGSV IYTMGLLDIV LREVDTKRFM QTAPWLGLIP GAEGQIVNAQ DGESPLVNLL KSATSAVVSS PGCLNPAAFY TMSKQAEAAD LLYKANMNGG
1101: SVLEYTLAFT SASLDKYCSK WSAPPKTGFV DITTSKDFYR IYGGLQIGYL EEITAPQSAQ HEVLGDSIAW GGCTIIYLLG QQLHFELFDF SYQVLNVSEV
1201: ETVSASHTHR NPQIHQGWEG LLEGMKKARR LNNHVFSMLK ARCPLEDKTA CAIKQSGAPL PRVRFENTVS AFETLPQKGT VG
0101: DLYLETYQVL DLEMSRLREI QRWQSSASAK LAADMQRFSR PERRINGPTV THLWSMLKLL DVLVQLDHLK NAKASIPNDF SWYKRTFTQV SAQWQDTDTM
0201: REELDDLQIF LSTRWAILLN LHVEMFRVNN VEDILQVLIV FIVESLELDF ALLFPERYIL LRVLPVLVVL ATPSEKDTEA LYKRVKLNRL INIFKNDPVI
0301: PAFPDLHLSP AAILKELSVY FQKFSSQTRL LTLPAPHELP PREALEYQRH YLIVNHIGAL RAEHDDFTIR FASSMNQLLL LKSNDGAYTE WCREVKGNMY
0401: DMVVEGFQLL SRWTARIWEQ CAWKFSRPCR DAGETPEASG SYSDYEKVVR FNYTAEERKA LVELVGYIKS VGSMLQRCDT LVADALWETI HAEVQDFVQN
0501: TLATMLRTTF RKKKDLSRIL SDMRTLSADW MANTRPEHEM PSSQHGNDES RGNFFYPRPV APTAAQVHCL QFLIYEVVSG GNLRRPGGFF GNNGSEIPVN
0601: DLKQLETFFY KLSFFLHILD YSASIGILTD LGFLWFREFY LESSRVIQFP IECSLPWMLI DYILEAQNSG LLESVLLPFD IYNDSAQQAL VVLRQRFLYD
0701: EIEAEVDHGF DIFVSRLSES IFTYYKSWSA SELLDPSFLF ALDNGEKFSI QPVRFTALFK MTKVKILGRT INLRSLIAQR MNRIFRENLE FLFDRFESQD
0801: LCAVVELEKL IDILKHSHEL LSQDLSIDPF SLMLNEMQEN ISLVSFSSRL ATQIWSEMQS DFLPNFILCN TTQRFVRSSK VPPTQKPSVP SAKPSFYCGT
0901: QDLNAAHQSF ARLHSGFFGI PHLFSIVKLL GSRSLPWLIR ALLDHISNKI TTLEPMISGL QEALPKSIGL LSFDGGVTGC MKLIREQLNW GTKSELKSEV
1001: LRGIKEIGSV IYTMGLLDIV LREVDTKRFM QTAPWLGLIP GAEGQIVNAQ DGESPLVNLL KSATSAVVSS PGCLNPAAFY TMSKQAEAAD LLYKANMNGG
1101: SVLEYTLAFT SASLDKYCSK WSAPPKTGFV DITTSKDFYR IYGGLQIGYL EEITAPQSAQ HEVLGDSIAW GGCTIIYLLG QQLHFELFDF SYQVLNVSEV
1201: ETVSASHTHR NPQIHQGWEG LLEGMKKARR LNNHVFSMLK ARCPLEDKTA CAIKQSGAPL PRVRFENTVS AFETLPQKGT VG
Arabidopsis Description
PIRtranscription activators [Source:TAIR;Acc:AT5G18410]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.