Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU6Hr1G012690.3 | |
| HORVU7Hr1G056570.7 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G306200.4 | Wheat | plastid | 93.56 | 98.99 |
| TraesCS4A01G408900.2 | Wheat | cytosol | 93.41 | 98.84 |
| TraesCS4B01G308000.2 | Wheat | cytosol | 93.41 | 98.84 |
| Os03t0143800-01 | Rice | cytosol | 89.24 | 94.79 |
| OQU93249 | Sorghum | cytosol | 88.58 | 94.16 |
| Zm00001d027633_P011 | Maize | mitochondrion | 70.13 | 92.03 |
| Solyc11g013290.1.1 | Tomato | cytosol | 22.25 | 85.88 |
| CDX70818 | Canola | cytosol | 6.3 | 81.9 |
| VIT_04s0043g00740.t01 | Wine grape | cytosol | 68.45 | 74.15 |
| AT5G18410.1 | Thale cress | cytosol | 68.81 | 73.27 |
| Bra006457.1-P | Field mustard | cytosol | 68.16 | 73.13 |
| CDX70816 | Canola | cytosol | 68.23 | 72.59 |
| CDY51228 | Canola | cytosol | 68.52 | 72.33 |
| Solyc11g013280.1.1 | Tomato | cytosol | 46.12 | 68.85 |
| GSMUA_Achr4P00580_001 | Banana | cytosol, extracellular, mitochondrion, nucleus | 13.4 | 66.55 |
| KRH33588 | Soybean | cytosol | 4.83 | 56.41 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G078840.3 | EnsemblPlantsGene:HORVU4Hr1G078840 | InterPro:Cytoplasmic_FMR1-int | InterPro:DUF1394 | PANTHER:PTHR12195 | PANTHER:PTHR12195:SF0 |
| PFAM:PF05994 | PFAM:PF07159 | PIRSF:PIRSF008153 | PRINTS:PR01698 | SEG:seg | UniParc:UPI000B483B48 |
| UniProt:A0A287PSD3 | MapMan:20.2.2.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:609311552..609335564
Molecular Weight (calculated)
155833.0 Da
IEP (calculated)
6.035
GRAVY (calculated)
-0.126
Length
1366 amino acids
Sequence
(BLAST)
(BLAST)
0001: QPTVRYELVH LLSPPTPPAT SLPPTPAHRR APPSPVLARR RRGAMAIPVE EAIAALSTFS LEDEQPDVQG LAVLLSSERY ATNSPIEYSD VAAYRLSLGE
0101: DTKAINQLNT LIQEGKEMAS LLYTYRSCVK ALPQLPDSMK HSQADLYLET YQVLDLEMSR LREIQRWQAS AASKLAADMQ RFSRPERLVN GPTITHFWSM
0201: LKLLDVLLQL DHLKNAKASI PNDFSWYKRT FTQVSTQWQD TDTMREELDD LQIFLSTRWA ILLNLHAEMF RTNTVEDILQ VLIVFCVESL ELDFALLFPE
0301: RHTLLRVLPV LVVLATSSEK ESESLYKRVK INRLLNIFKN DPVIPAFPDL HLSPAAMLKE LSSYFQNFSS QIRLLTLPAP HEIPPRELQD YQRHYLILNH
0401: MGTIRAEHDD FSIRFASAMN QMITLKSSDG ADNDWSRDIK GNMYDTVVEG FQLLSRWTGR IWEQCAWKFS RPCKEPPISD SQQDSTTFFD YEKVVRWNYT
0501: AEERRALLEL IGYIKSIGSM MQHCDTLVSE ALWETIHMEV QDFVQDKLDT MLRTTFRKKK DLSRILSDMR TLSADWMANT SKADPEQHSL HQETEEMRQT
0601: TFYPRPVAPT AAQIHCLQFL ICELVSGGNL RKPGGLFGNS SSGIPVEDLK QLETFFYKLS FFLHILDFTA TIGTLTDLGF LWFREFYLES SRVIQFPIEC
0701: SLPWMLVDHV IESQDAGLLE SILIPLDLYN DSAQHALTYL KQRFLYDEIE AEVDLSFDLL VQKLNEVIFT YYKSCAARYQ SSLFSFTYPL IYLECLFVCA
0801: DPFPFLICST LLDSSFTYAC DDGEKYFVKP LRFDAIFKLR RVMILGRTID LRSLITQRMN KLFRENIDFL LERFEYGDLC GVVELQQLMD ILELTHQSIS
0901: RFLELDSYSL MISEMQENLS LVSYSSRISS QIWNEMQTDF LPNFILCNTT QRFVRSLKGA HHSSQRSDTS TGKPYFYCGS HDLTMAYQGL AGLYRDFFGI
1001: PHMFAVVKLL GSRSLPGIIR ALLDHISSKI TAMVPKVTGL QEALPKSIGL LSFDGGIAGC QKIIHEILTW EAKSDVKIEV LHDLKEIGSA LYWMSLLDIV
1101: LRQIDTTQFM QSAPWLGLVP GNDGQVKHAY SDNTPFTTLL SAATSAVASS PACANPSSYL VMSKQAEAAS LLYKSNLNSG SVLEYALAFT SAALDRHYSK
1201: WSATPKTGFI DITTSKDFYR VFSGLQYSYL EDSMTNPSKK REMVGDSVAW AGCTIMYLLG QQLHFELFDF SYQFLNVAEI ETATVSLYQP TDRSKSPNIF
1301: QGYEVILEAM RKARRLNNHV FSMLRARCPL EDKVACAIKP SGAPLHRMKF SNIVSAFETL PQRANS
0101: DTKAINQLNT LIQEGKEMAS LLYTYRSCVK ALPQLPDSMK HSQADLYLET YQVLDLEMSR LREIQRWQAS AASKLAADMQ RFSRPERLVN GPTITHFWSM
0201: LKLLDVLLQL DHLKNAKASI PNDFSWYKRT FTQVSTQWQD TDTMREELDD LQIFLSTRWA ILLNLHAEMF RTNTVEDILQ VLIVFCVESL ELDFALLFPE
0301: RHTLLRVLPV LVVLATSSEK ESESLYKRVK INRLLNIFKN DPVIPAFPDL HLSPAAMLKE LSSYFQNFSS QIRLLTLPAP HEIPPRELQD YQRHYLILNH
0401: MGTIRAEHDD FSIRFASAMN QMITLKSSDG ADNDWSRDIK GNMYDTVVEG FQLLSRWTGR IWEQCAWKFS RPCKEPPISD SQQDSTTFFD YEKVVRWNYT
0501: AEERRALLEL IGYIKSIGSM MQHCDTLVSE ALWETIHMEV QDFVQDKLDT MLRTTFRKKK DLSRILSDMR TLSADWMANT SKADPEQHSL HQETEEMRQT
0601: TFYPRPVAPT AAQIHCLQFL ICELVSGGNL RKPGGLFGNS SSGIPVEDLK QLETFFYKLS FFLHILDFTA TIGTLTDLGF LWFREFYLES SRVIQFPIEC
0701: SLPWMLVDHV IESQDAGLLE SILIPLDLYN DSAQHALTYL KQRFLYDEIE AEVDLSFDLL VQKLNEVIFT YYKSCAARYQ SSLFSFTYPL IYLECLFVCA
0801: DPFPFLICST LLDSSFTYAC DDGEKYFVKP LRFDAIFKLR RVMILGRTID LRSLITQRMN KLFRENIDFL LERFEYGDLC GVVELQQLMD ILELTHQSIS
0901: RFLELDSYSL MISEMQENLS LVSYSSRISS QIWNEMQTDF LPNFILCNTT QRFVRSLKGA HHSSQRSDTS TGKPYFYCGS HDLTMAYQGL AGLYRDFFGI
1001: PHMFAVVKLL GSRSLPGIIR ALLDHISSKI TAMVPKVTGL QEALPKSIGL LSFDGGIAGC QKIIHEILTW EAKSDVKIEV LHDLKEIGSA LYWMSLLDIV
1101: LRQIDTTQFM QSAPWLGLVP GNDGQVKHAY SDNTPFTTLL SAATSAVASS PACANPSSYL VMSKQAEAAS LLYKSNLNSG SVLEYALAFT SAALDRHYSK
1201: WSATPKTGFI DITTSKDFYR VFSGLQYSYL EDSMTNPSKK REMVGDSVAW AGCTIMYLLG QQLHFELFDF SYQFLNVAEI ETATVSLYQP TDRSKSPNIF
1301: QGYEVILEAM RKARRLNNHV FSMLRARCPL EDKVACAIKP SGAPLHRMKF SNIVSAFETL PQRANS
0001: MAVPVEEAIA ALSTFSLEDE QPEVQGPAVM VSAERAATDS PIEYSDVAAY RLSLSEDTKA LNQLNTLIQE GKEMASILYT YRSCVKALPQ LPESMKHSQA
0101: DLYLETYQVL DLEMSRLREI QRWQSSASAK LAADMQRFSR PERRINGPTV THLWSMLKLL DVLVQLDHLK NAKASIPNDF SWYKRTFTQV SAQWQDTDTM
0201: REELDDLQIF LSTRWAILLN LHVEMFRVNN VEDILQVLIV FIVESLELDF ALLFPERYIL LRVLPVLVVL ATPSEKDTEA LYKRVKLNRL INIFKNDPVI
0301: PAFPDLHLSP AAILKELSVY FQKFSSQTRL LTLPAPHELP PREALEYQRH YLIVNHIGAL RAEHDDFTIR FASSMNQLLL LKSNDGAYTE WCREVKGNMY
0401: DMVVEGFQLL SRWTARIWEQ CAWKFSRPCR DAGETPEASG SYSDYEKVVR FNYTAEERKA LVELVGYIKS VGSMLQRCDT LVADALWETI HAEVQDFVQN
0501: TLATMLRTTF RKKKDLSRIL SDMRTLSADW MANTRPEHEM PSSQHGNDES RGNFFYPRPV APTAAQVHCL QFLIYEVVSG GNLRRPGGFF GNNGSEIPVN
0601: DLKQLETFFY KLSFFLHILD YSASIGILTD LGFLWFREFY LESSRVIQFP IECSLPWMLI DYILEAQNSG LLESVLLPFD IYNDSAQQAL VVLRQRFLYD
0701: EIEAEVDHGF DIFVSRLSES IFTYYKSWSA SELLDPSFLF ALDNGEKFSI QPVRFTALFK MTKVKILGRT INLRSLIAQR MNRIFRENLE FLFDRFESQD
0801: LCAVVELEKL IDILKHSHEL LSQDLSIDPF SLMLNEMQEN ISLVSFSSRL ATQIWSEMQS DFLPNFILCN TTQRFVRSSK VPPTQKPSVP SAKPSFYCGT
0901: QDLNAAHQSF ARLHSGFFGI PHLFSIVKLL GSRSLPWLIR ALLDHISNKI TTLEPMISGL QEALPKSIGL LSFDGGVTGC MKLIREQLNW GTKSELKSEV
1001: LRGIKEIGSV IYTMGLLDIV LREVDTKRFM QTAPWLGLIP GAEGQIVNAQ DGESPLVNLL KSATSAVVSS PGCLNPAAFY TMSKQAEAAD LLYKANMNGG
1101: SVLEYTLAFT SASLDKYCSK WSAPPKTGFV DITTSKDFYR IYGGLQIGYL EEITAPQSAQ HEVLGDSIAW GGCTIIYLLG QQLHFELFDF SYQVLNVSEV
1201: ETVSASHTHR NPQIHQGWEG LLEGMKKARR LNNHVFSMLK ARCPLEDKTA CAIKQSGAPL PRVRFENTVS AFETLPQKGT VG
0101: DLYLETYQVL DLEMSRLREI QRWQSSASAK LAADMQRFSR PERRINGPTV THLWSMLKLL DVLVQLDHLK NAKASIPNDF SWYKRTFTQV SAQWQDTDTM
0201: REELDDLQIF LSTRWAILLN LHVEMFRVNN VEDILQVLIV FIVESLELDF ALLFPERYIL LRVLPVLVVL ATPSEKDTEA LYKRVKLNRL INIFKNDPVI
0301: PAFPDLHLSP AAILKELSVY FQKFSSQTRL LTLPAPHELP PREALEYQRH YLIVNHIGAL RAEHDDFTIR FASSMNQLLL LKSNDGAYTE WCREVKGNMY
0401: DMVVEGFQLL SRWTARIWEQ CAWKFSRPCR DAGETPEASG SYSDYEKVVR FNYTAEERKA LVELVGYIKS VGSMLQRCDT LVADALWETI HAEVQDFVQN
0501: TLATMLRTTF RKKKDLSRIL SDMRTLSADW MANTRPEHEM PSSQHGNDES RGNFFYPRPV APTAAQVHCL QFLIYEVVSG GNLRRPGGFF GNNGSEIPVN
0601: DLKQLETFFY KLSFFLHILD YSASIGILTD LGFLWFREFY LESSRVIQFP IECSLPWMLI DYILEAQNSG LLESVLLPFD IYNDSAQQAL VVLRQRFLYD
0701: EIEAEVDHGF DIFVSRLSES IFTYYKSWSA SELLDPSFLF ALDNGEKFSI QPVRFTALFK MTKVKILGRT INLRSLIAQR MNRIFRENLE FLFDRFESQD
0801: LCAVVELEKL IDILKHSHEL LSQDLSIDPF SLMLNEMQEN ISLVSFSSRL ATQIWSEMQS DFLPNFILCN TTQRFVRSSK VPPTQKPSVP SAKPSFYCGT
0901: QDLNAAHQSF ARLHSGFFGI PHLFSIVKLL GSRSLPWLIR ALLDHISNKI TTLEPMISGL QEALPKSIGL LSFDGGVTGC MKLIREQLNW GTKSELKSEV
1001: LRGIKEIGSV IYTMGLLDIV LREVDTKRFM QTAPWLGLIP GAEGQIVNAQ DGESPLVNLL KSATSAVVSS PGCLNPAAFY TMSKQAEAAD LLYKANMNGG
1101: SVLEYTLAFT SASLDKYCSK WSAPPKTGFV DITTSKDFYR IYGGLQIGYL EEITAPQSAQ HEVLGDSIAW GGCTIIYLLG QQLHFELFDF SYQVLNVSEV
1201: ETVSASHTHR NPQIHQGWEG LLEGMKKARR LNNHVFSMLK ARCPLEDKTA CAIKQSGAPL PRVRFENTVS AFETLPQKGT VG
Arabidopsis Description
PIRtranscription activators [Source:TAIR;Acc:AT5G18410]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.