Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G07880.1 | KRH51687 | AT1G75840.1 | 10798620 |
| AT3G07880.1 | KRH61024 | AT1G75840.1 | 10798620 |
| AT3G07880.1 | KRH61026 | AT1G75840.1 | 10798620 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11529 | Soybean | nucleus | 89.11 | 86.67 |
| KRH14075 | Soybean | cytosol | 65.73 | 71.81 |
| KRH51157 | Soybean | cytosol | 71.77 | 71.49 |
| KRH74038 | Soybean | cytosol | 65.73 | 69.96 |
| VIT_00s0187g00210.t01 | Wine grape | cytosol | 65.32 | 69.83 |
| KRH01997 | Soybean | cytosol | 69.76 | 69.48 |
| PGSC0003DMT400060556 | Potato | cytosol | 66.13 | 67.49 |
| Solyc04g014760.2.1 | Tomato | nucleus | 65.73 | 67.08 |
| PGSC0003DMT400021800 | Potato | cytosol | 62.9 | 66.95 |
| Solyc05g054110.2.1 | Tomato | cytosol | 62.5 | 66.52 |
| Bra001274.1-P | Field mustard | cytosol | 56.05 | 65.57 |
| Bra040037.1-P | Field mustard | cytosol | 59.68 | 65.2 |
| AT3G07880.1 | Thale cress | cytosol | 61.69 | 63.75 |
| Bra029684.1-P | Field mustard | cytosol | 62.1 | 62.1 |
| CDY35970 | Canola | cytosol | 62.1 | 62.1 |
| CDY28012 | Canola | cytosol | 61.69 | 61.94 |
| Solyc11g012270.1.1 | Tomato | cytosol | 64.52 | 61.54 |
| PGSC0003DMT400034743 | Potato | cytosol | 63.31 | 60.38 |
| GSMUA_Achr9P12630_001 | Banana | cytosol | 56.85 | 59.24 |
| Zm00001d051687_P001 | Maize | cytosol | 55.24 | 59.05 |
| Zm00001d017859_P002 | Maize | cytosol | 57.66 | 57.89 |
| GSMUA_Achr7P20430_001 | Banana | cytosol | 59.27 | 56.11 |
| TraesCS6B01G310800.1 | Wheat | cytosol | 56.85 | 54.86 |
| GSMUA_Achr5P04110_001 | Banana | cytosol | 58.06 | 54.55 |
| TraesCS6D01G262900.1 | Wheat | cytosol | 56.05 | 53.26 |
| TraesCS6A01G282400.1 | Wheat | cytosol | 55.65 | 52.87 |
| KRH58804 | Soybean | cytosol | 49.6 | 52.12 |
| OQU85511 | Sorghum | mitochondrion | 44.35 | 51.64 |
| KRG97381 | Soybean | cytosol | 50.4 | 51.02 |
| KRH31533 | Soybean | cytosol | 48.79 | 49.79 |
| KRH42697 | Soybean | cytosol | 47.58 | 49.58 |
| Os06t0318300-02 | Rice | cytosol | 52.82 | 48.52 |
| KXG19891 | Sorghum | cytosol | 54.44 | 47.7 |
| KRG95708 | Soybean | cytosol | 39.52 | 42.06 |
| Os02t0719000-01 | Rice | cytosol | 58.87 | 38.73 |
| KRH19602 | Soybean | cytosol | 37.1 | 38.49 |
| KRH32228 | Soybean | cytosol | 37.1 | 34.85 |
Protein Annotations
| EntrezGene:100812303 | Gene3D:2.70.50.30 | MapMan:27.4.4 | UniProt:A0A0R0IBY6 | EMBL:ACUP02005380 | EnsemblPlantsGene:GLYMA_09G010300 |
| GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0030234 | GO:GO:0050790 | InterPro:IPR024792 | InterPro:Ig_E-set | EnsemblPlants:KRH36543 |
| ProteinID:KRH36543 | ProteinID:KRH36543.1 | PFAM:PF02115 | PRINTS:PR00492 | PANTHER:PTHR10980 | PANTHER:PTHR10980:SF30 |
| InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI | SUPFAM:SSF81296 | UniParc:UPI00054A42E9 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:-:792979..794865
Molecular Weight (calculated)
27844.2 Da
IEP (calculated)
4.544
GRAVY (calculated)
-0.815
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLGIAKDMG FDEKVKDNDG AGDDDASHRV HAAKAGTDHE SGHEGGGTFS RYRSESSIAA TEDEDDEEER KIELGPQCTL KEQLEKDKDD ESLRRWKEQL
101: LGSVDINSVG ETLEPNVKIL SLAIKSADRP DIVLAIPEGG NPKGLWFTLK EGSRYRLMFT FQVENNIVSG LKYTNTVWKT GVKVDSSKEM IGTFSPQAEP
201: YTHEMPEETT PSGMFARGQY SARSKFVDDD NKCYLEINYT FDIRKEWQ
101: LGSVDINSVG ETLEPNVKIL SLAIKSADRP DIVLAIPEGG NPKGLWFTLK EGSRYRLMFT FQVENNIVSG LKYTNTVWKT GVKVDSSKEM IGTFSPQAEP
201: YTHEMPEETT PSGMFARGQY SARSKFVDDD NKCYLEINYT FDIRKEWQ
001: MVLEDEMKKG EASGETSEKM GLSRKNSGSS LSPTEDDEED EDKKLELGPM IALKEQLERD KDDESLRRWK EQLLGVVDLE DVGETPDPVV KILDLTIRSP
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ
Arabidopsis Description
Immunoglobulin E-set superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.