CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58804	Soybean	cytosol	81.09	81.78
KRH31533	Soybean	cytosol	63.45	62.14
Zm00001d010398_P001	Maize	cytosol	52.52	58.96
KRG97381	Soybean	cytosol	60.5	58.78
EES18012	Sorghum	cytosol	52.52	57.6
GSMUA_Achr10P...	Banana	cytosol	54.62	57.52
EES18016	Sorghum	cytosol	52.1	57.41
Os01t0913600-01	Rice	plasma membrane	52.1	57.14
TraesCS3D01G414900.1	Wheat	cytosol	48.74	56.59
TraesCS3A01G419200.1	Wheat	cytosol	48.74	56.59
TraesCS3B01G454500.1	Wheat	cytosol	48.32	56.1
VIT_05s0062g00780.t01	Wine grape	cytosol	57.98	55.87
Zm00001d038046_P003	Maize	cytosol	50.42	55.81
GSMUA_Achr10P...	Banana	cytosol	53.78	52.89
KXG22740	Sorghum	cytosol	47.9	52.78
KRH14075	Soybean	cytosol	50.0	52.42
KRH74038	Soybean	cytosol	50.84	51.93
GSMUA_Achr11P...	Banana	cytosol	54.62	51.38
KRH51157	Soybean	cytosol	52.94	50.6
KRH01997	Soybean	cytosol	51.26	49.0
HORVU3Hr1G092980.2	Barley	cytosol	50.42	48.58
PGSC0003DMT400011652	Potato	cytosol	39.5	48.45
TraesCS1A01G445800.1	Wheat	cytosol	47.06	48.07
Solyc12g098650.1.1	Tomato	cytosol	39.92	47.98
KRH36543	Soybean	cytosol	49.58	47.58
KRH11529	Soybean	nucleus	49.16	45.88
KRG95708	Soybean	cytosol	40.76	41.63
KRH19602	Soybean	cytosol	38.66	38.49
TraesCS1B01G480500.2	Wheat	cytosol, plastid	47.48	35.31
KRH32228	Soybean	cytosol	39.08	35.23
TraesCS1D01G454500.1	Wheat	plastid	48.32	35.06
HORVU1Hr1G095170.3	Barley	cytosol, mitochondrion, nucleus	41.6	34.02
Zm00001d010397_P002	Maize	cytosol	23.11	32.54

Protein Annotations

EntrezGene:100780525	Gene3D:2.70.50.30	MapMan:27.4.4	EMBL:ACUP02004823	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G105700
GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	UniProt:I1KS37	InterPro:IPR024792	InterPro:Ig_E-set
EnsemblPlants:KRH42697	ProteinID:KRH42697	ProteinID:KRH42697.1	PFAM:PF02115	PRINTS:PR00492	PANTHER:PTHR10980
PANTHER:PTHR10980:SF30	InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	SUPFAM:SSF81296	UniParc:UPI0002338DED	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:8165282..8167633

Molecular Weight (calculated)

26812.4 Da

IEP (calculated)

4.475

GRAVY (calculated)

-0.624

Length

238 amino acids

Sequence
(BLAST)

001: MSAAVSATKD VPFNAHLEED IKNKEINKVV NVGEADQIPY NDDAEGTDSE AEEDPKLELD LGPQCSLKEQ LEKDKEDESL RKWKEQLLGG IDVSAVGENK
101: EPEVKIVSLT IICPGRPDLI LPIPFTSDAK KSIFTLKEGS QYQLKFSFTV SNNIVSGLKY TNVVWKTGLR VDNTKKMLGT YSPSQELYTY ELEEETTPSG
201: LFARGTYSAR TKFVDDDRKC YLDTSYHFEI QKNWPTPI

Best Arabidopsis Sequence Match ( AT1G12070.1 )
(BLAST)

001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL

Arabidopsis Description

At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.