Factsheet for GSMUA_Achr10P28900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	69.01	73.89
Os01t0913600-01	Rice	plasma membrane	64.05	71.43
TraesCS3D01G414900.1	Wheat	cytosol	59.5	70.24
TraesCS3B01G454500.1	Wheat	cytosol	57.02	67.32
TraesCS3A01G419200.1	Wheat	cytosol	56.61	66.83
Zm00001d010398_P001	Maize	cytosol	57.85	66.04
GSMUA_Achr11P...	Banana	cytosol	69.01	66.01
Zm00001d038046_P003	Maize	cytosol	58.26	65.58
EES18012	Sorghum	cytosol	58.26	64.98
EES18016	Sorghum	cytosol	57.85	64.81
KXG22740	Sorghum	cytosol	53.72	60.19
HORVU3Hr1G092980.2	Barley	cytosol	59.92	58.7
KRH58804	Soybean	cytosol	52.48	53.81
KRH42697	Soybean	cytosol	52.89	53.78
TraesCS1A01G445800.1	Wheat	cytosol	50.83	52.79
KRH31533	Soybean	cytosol	50.0	49.79
GSMUA_Achr7P20430_001	Banana	cytosol	53.72	49.62
GSMUA_Achr9P12630_001	Banana	cytosol	48.35	49.16
VIT_05s0062g00780.t01	Wine grape	cytosol	49.17	48.18
KRG97381	Soybean	cytosol	48.76	48.16
PGSC0003DMT400011652	Potato	cytosol	36.78	45.88
GSMUA_Achr5P04110_001	Banana	cytosol	49.17	45.08
Solyc12g098650.1.1	Tomato	cytosol	36.36	44.44
Zm00001d010397_P002	Maize	cytosol	28.1	40.24
TraesCS1B01G480500.2	Wheat	cytosol, plastid	52.89	40.0
GSMUA_Achr5P21760_001	Banana	cytosol	37.19	38.63
TraesCS1D01G454500.1	Wheat	plastid	52.07	38.41
HORVU1Hr1G095170.3	Barley	cytosol, mitochondrion, nucleus	44.63	37.11
GSMUA_Achr6P36650_001	Banana	mitochondrion	38.84	30.92

Protein Annotations

Gene3D:2.70.50.30	MapMan:27.4.4	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:GSMUA_Achr10G28900_001
EnsemblPlants:GSMUA_Achr10P28900_001	EnsemblPlants:GSMUA_Achr10T28900_001	InterPro:IPR024792	InterPro:Ig_E-set	UniProt:M0RMB4	PFAM:PF02115
PANTHER:PTHR10980	PANTHER:PTHR10980:SF20	InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	SUPFAM:SSF81296	UniParc:UPI000295B677
SEG:seg	:	:	:	:	:

Description

Rho GDP-dissociation inhibitor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G28900_001]

Coordinates

chr10:-:31571402..31572550

Molecular Weight (calculated)

27161.6 Da

IEP (calculated)

4.274

GRAVY (calculated)

-0.636

Length

242 amino acids

Sequence
(BLAST)

001: MSIALGVHSG SKDAAETSPD MDRDEHKDEG AIGDADRKLS CTSDVNEEEH GSDNEDGEEK RAVVLGPQIA LKEQLEMDKD DESLRKWKEQ LLGNIDLTDV
101: GEVLEPDVKI QDLTILTPDR PDLVLPIPFV PDAKGFAFAL KDGSHYRLRF SFTVSDNIVS GLMYTNTVWK SGMRVENTKV MLGTFSPQKD PYTYELEEET
201: TPAGYFARGS YSAKTKFVDD DGKCYLDLSY YFEIRKEWPT PA

Best Arabidopsis Sequence Match ( AT1G12070.1 )
(BLAST)

001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL

Arabidopsis Description

At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.