CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97381	Soybean	cytosol	83.95	83.27
KRH42697	Soybean	cytosol	62.14	63.45
KRH58804	Soybean	cytosol	59.67	61.44
Os01t0913600-01	Rice	plasma membrane	49.79	55.76
TraesCS3D01G414900.1	Wheat	cytosol	46.91	55.61
TraesCS3B01G454500.1	Wheat	cytosol	46.09	54.63
TraesCS3A01G419200.1	Wheat	cytosol	45.68	54.15
EES18016	Sorghum	cytosol	47.33	53.24
GSMUA_Achr10P...	Banana	cytosol	49.38	53.1
Zm00001d010398_P001	Maize	cytosol	46.09	52.83
VIT_05s0062g00780.t01	Wine grape	cytosol	53.5	52.63
Zm00001d038046_P003	Maize	cytosol	46.5	52.56
KRH14075	Soybean	cytosol	48.97	52.42
KRH74038	Soybean	cytosol	49.79	51.93
EES18012	Sorghum	cytosol	46.09	51.61
GSMUA_Achr10P...	Banana	cytosol	49.79	50.0
KXG22740	Sorghum	cytosol	43.62	49.07
KRH36543	Soybean	cytosol	49.79	48.79
KRH11529	Soybean	nucleus	49.79	47.45
GSMUA_Achr11P...	Banana	cytosol	49.38	47.43
HORVU3Hr1G092980.2	Barley	cytosol	48.15	47.37
KRH51157	Soybean	cytosol	47.74	46.59
TraesCS1A01G445800.1	Wheat	cytosol	43.62	45.49
KRH01997	Soybean	cytosol	46.5	45.38
PGSC0003DMT400011652	Potato	cytosol	35.8	44.85
Solyc12g098650.1.1	Tomato	cytosol	36.21	44.44
KRG95708	Soybean	cytosol	37.45	39.06
KRH19602	Soybean	cytosol	36.63	37.24
TraesCS1B01G480500.2	Wheat	cytosol, plastid	45.68	34.69
KRH32228	Soybean	cytosol	35.8	32.95
TraesCS1D01G454500.1	Wheat	plastid	43.21	32.01
HORVU1Hr1G095170.3	Barley	cytosol, mitochondrion, nucleus	37.86	31.62
Zm00001d010397_P002	Maize	cytosol	20.99	30.18

Protein Annotations

EntrezGene:100793380	Gene3D:2.70.50.30	MapMan:27.4.4	UniProt:A0A0R0HM32	EMBL:ACUP02007146	EnsemblPlantsGene:GLYMA_11G252600
GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	InterPro:IPR024792	InterPro:Ig_E-set	EnsemblPlants:KRH31533
ProteinID:KRH31533	ProteinID:KRH31533.1	ProteinID:KRH31534.1	ProteinID:KRH31535.1	ProteinID:KRH31536.1	PFAM:PF02115
PRINTS:PR00492	PANTHER:PTHR10980	PANTHER:PTHR10980:SF30	InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	SUPFAM:SSF81296
UniParc:UPI00019AAA03	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:34362240..34364964

Molecular Weight (calculated)

27415.0 Da

IEP (calculated)

4.487

GRAVY (calculated)

-0.781

Length

243 amino acids

Sequence
(BLAST)

001: MSAAVSSTTS HLEEELKNNN NNNNNVGGES DQPPYNEGAN SDVAEETEPE EDDDSKLESN KELDLGPQFT LKEQLEKDKD DVSLRKWKEQ LLGSVDMSVV
101: GSESKDPEVK ILSLIITSPD KPDLTLPIPF TTDAKKSLFI LKEGSKCQMK FTFTVSNNIV SGLKYTNVVW KTGVRVDSRK KMLGTFSPKQ EPYTFELEEE
201: TIPSGMFVRG TYAARTKFVD DDRKCYLDVS YYFEIQKNRP TPQ

Best Arabidopsis Sequence Match ( AT1G12070.1 )
(BLAST)

001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL

Arabidopsis Description

At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.