Factsheet for TraesCS1D01G454500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, golgi, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G445800.1	Wheat	cytosol	57.62	81.12
TraesCS3D01G414900.1	Wheat	cytosol	44.21	70.73
TraesCS1B01G480500.2	Wheat	cytosol, plastid	64.63	66.25
KXG22740	Sorghum	cytosol	43.29	65.74
GSMUA_Achr10P...	Banana	cytosol	38.41	55.75
GSMUA_Achr10P...	Banana	cytosol	38.41	52.07
HORVU1Hr1G095170.3	Barley	cytosol, mitochondrion, nucleus	45.12	50.86
GSMUA_Achr11P...	Banana	cytosol	38.11	49.41
KRH42697	Soybean	cytosol	35.06	48.32
KRH58804	Soybean	cytosol	34.45	47.88
VIT_05s0062g00780.t01	Wine grape	cytosol	34.45	45.75
KRG97381	Soybean	cytosol	33.23	44.49
PGSC0003DMT400011652	Potato	cytosol	25.91	43.81
KRH31533	Soybean	cytosol	32.01	43.21
TraesCS6D01G262900.1	Wheat	cytosol	33.54	42.15
Solyc12g098650.1.1	Tomato	cytosol	25.3	41.92

Protein Annotations

EnsemblPlants:TraesCS1D01G454500.1	EnsemblPlantsGene:TraesCS1D01G454500	Gene3D:2.70.50.30	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0030234	InterPro:IPR024792	InterPro:Ig_E-set
InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	PANTHER:PTHR10980	PANTHER:PTHR10980:SF20	PFAM:PF02115	PRINTS:PR00492
SEG:seg	SUPFAM:SSF81296	MapMan:27.4.4	:	:	:

Description

No Description!

Coordinates

chr1D:-:495124755..495127761

Molecular Weight (calculated)

36634.2 Da

IEP (calculated)

4.827

GRAVY (calculated)

-0.586

Length

328 amino acids

Sequence
(BLAST)

001: MSFPPFPSFP LTKTKVELKS HSHNNPTPAL LLCCWLLSKN KSPHPLPFPF PQINQSLPPS ITRAGQASPP RFDFASKSLG EGRGGEGRGD PRRKMDQQEE
101: EASVSVSVSV PSSLPPEEEE EEEEQEEEED DMGAVKMALG PQVPLKDLLH LHKGEEEEQE DESLRRWKEQ LLGPDALHTT NLLALALGAE TVEPEVTILN
201: LTILAPGRPD LVLPIPFVPD DKGHAFALKD GTAYSFRFSF TVSNNIVSGL KYSHTVWKTR VKVENQKVML GTFSPQQEPY TYKAEEDSTP SGIFARGSYS
301: ARLKFVDDDG KVYLDMKYSF EIRKDWPA

Best Arabidopsis Sequence Match ( AT1G12070.1 )
(BLAST)

001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL

Arabidopsis Description

At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.