Factsheet for Solyc12g098650.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011652	Potato	cytosol	91.41	93.3
TraesCS3D01G414900.1	Wheat	cytosol	43.43	41.95
Zm00001d010398_P001	Maize	cytosol	43.43	40.57
TraesCS3B01G454500.1	Wheat	cytosol	41.92	40.49
EES18016	Sorghum	cytosol	43.94	40.28
GSMUA_Achr10P...	Banana	cytosol	45.96	40.27
KRH58804	Soybean	cytosol	47.98	40.25
TraesCS3A01G419200.1	Wheat	cytosol	41.41	40.0
KRH42697	Soybean	cytosol	47.98	39.92
Os01t0913600-01	Rice	plasma membrane	43.43	39.63
KXG22740	Sorghum	cytosol	42.93	39.35
EES18012	Sorghum	cytosol	42.93	39.17
VIT_05s0062g00780.t01	Wine grape	cytosol	47.98	38.46
Solyc05g054110.2.1	Tomato	cytosol	44.44	37.77
Zm00001d038046_P003	Maize	cytosol	40.91	37.67
KRG97381	Soybean	cytosol	45.45	36.73
GSMUA_Achr11P...	Banana	cytosol	46.46	36.36
GSMUA_Achr10P...	Banana	cytosol	44.44	36.36
KRH31533	Soybean	cytosol	44.44	36.21
Solyc04g014760.2.1	Tomato	nucleus	42.93	34.98
TraesCS1A01G445800.1	Wheat	cytosol	39.9	33.91
HORVU3Hr1G092980.2	Barley	cytosol	41.92	33.6
Solyc11g012270.1.1	Tomato	cytosol	41.41	31.54
Solyc09g072670.2.1	Tomato	cytosol	33.84	30.45
TraesCS1D01G454500.1	Wheat	plastid	41.92	25.3
TraesCS1B01G480500.2	Wheat	cytosol, plastid	40.4	25.0
HORVU1Hr1G095170.3	Barley	cytosol, mitochondrion, nucleus	36.36	24.74
Zm00001d010397_P002	Maize	cytosol	17.17	20.12

Protein Annotations

Gene3D:2.70.50.30	MapMan:27.4.4	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	InterPro:IPR024792
InterPro:Ig_E-set	UniProt:K4DHN8	PFAM:PF02115	PRINTS:PR00492	PANTHER:PTHR10980	PANTHER:PTHR10980:SF30
InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	SUPFAM:SSF81296	EnsemblPlantsGene:Solyc12g098650.1	EnsemblPlants:Solyc12g098650.1.1	UniParc:UPI000276A38C
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr12:+:66087615..66089718

Molecular Weight (calculated)

23011.1 Da

IEP (calculated)

4.170

GRAVY (calculated)

-0.559

Length

198 amino acids

Sequence
(BLAST)

001: MSAIVEPISP SKALIMDTMM DENNQQENMK MQDDESLMEE QFLGSSDHST SDEVEAENEL EPEVQEPKLY IICPERPELV LCEPFFSTPK ECLFTLKEAS
101: RYKLKFSFTV SNNVVCGLKY INTTWKTGVR VDKSQVMLGT FEPRKEPYVY ELEEDVTPSG VFARGLYTTR TQVIDEKERC YVDITYYFDI QRQWPESS

Best Arabidopsis Sequence Match ( AT3G07880.1 )
(BLAST)

001: MSLVSGARDM GFDDNNNNKN NKDGDDENSS SRTRADDDAL SRQMSESSLC ATEEEEDDDS KLQLGPQYTI KEHLEKDKDD ESLRKWKEQL LGSVDVTNIG
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL

Arabidopsis Description

GDI1Putative RHO GDP-dissociation inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q541X0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.