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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G454500.1 Wheat cytosol 75.3 90.73
TraesCS3A01G419200.1 Wheat cytosol 75.3 90.73
TraesCS3D01G414900.1 Wheat cytosol 73.68 88.78
Os01t0913600-01 Rice plasma membrane 74.09 84.33
EES18012 Sorghum cytosol 71.26 81.11
EES18016 Sorghum cytosol 70.04 80.09
Zm00001d010398_P001 Maize cytosol 68.42 79.72
Zm00001d038046_P003 Maize cytosol 68.42 78.6
GSMUA_Achr10P... Banana cytosol 58.3 63.72
GSMUA_Achr10P... Banana cytosol 58.7 59.92
GSMUA_Achr11P... Banana cytosol 58.3 56.92
KRH58804 Soybean cytosol 48.58 50.85
KRH42697 Soybean cytosol 48.58 50.42
VIT_05s0062g00780.t01 Wine grape cytosol 50.2 50.2
KRG97381 Soybean cytosol 47.77 48.16
KRH31533 Soybean cytosol 47.37 48.15
HORVU1Hr1G095170.3 Barley cytosol, mitochondrion, nucleus 52.23 44.33
PGSC0003DMT400011652 Potato cytosol 33.6 42.78
Solyc12g098650.1.1 Tomato cytosol 33.6 41.92
Protein Annotations
Gene3D:2.70.50.30MapMan:27.4.4UniProt:A0A287MB69GO:GO:0003674GO:GO:0005094GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0030234GO:GO:0050790
EnsemblPlantsGene:HORVU3Hr1G092980EnsemblPlants:HORVU3Hr1G092980.2InterPro:IPR024792InterPro:Ig_E-setPFAM:PF02115PANTHER:PTHR10980
PANTHER:PTHR10980:SF20InterPro:RhoGDI_dom_sfInterPro:Rho_GDISUPFAM:SSF81296UniParc:UPI000B46BCEASEG:seg
Description
No Description!
Coordinates
chrchr3H:-:640648728..640650774
Molecular Weight (calculated)
28344.2 Da
IEP (calculated)
4.847
GRAVY (calculated)
-0.836
Length
247 amino acids
Sequence
(BLAST)
001: DRRRQPPHLC PAFPRVRRRR SPVARETDSR AHSVRASPAM DNKEEHTGNH PEREEVEEEE DEEAKRAVVL GPQVPLKEQL ELDKDDESLR RWKEQLLGQV
101: DTEQLGETAE PEVKVLNLTI LSPDRPDLVL PIPFVPDEKG YAFALKDGSA YSFRFSFIVS NNIVSGLKYT NTVWKTGVRV ENQKMMLGTF SPQAEPYTYE
201: GEEETTPAGM FARGSYSAKL KFVDDDGKCY LEMSYYFEIR KDWPTGQ
Best Arabidopsis Sequence Match ( AT3G07880.1 )
(BLAST)
001: MSLVSGARDM GFDDNNNNKN NKDGDDENSS SRTRADDDAL SRQMSESSLC ATEEEEDDDS KLQLGPQYTI KEHLEKDKDD ESLRKWKEQL LGSVDVTNIG
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL
Arabidopsis Description
GDI1Putative RHO GDP-dissociation inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q541X0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.