Factsheet for Os01t0913600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G414900.1	Wheat	cytosol	82.03	86.83
EES18012	Sorghum	cytosol	85.71	85.71
TraesCS3B01G454500.1	Wheat	cytosol	80.18	84.88
TraesCS3A01G419200.1	Wheat	cytosol	80.18	84.88
Zm00001d038046_P003	Maize	cytosol	82.03	82.79
Zm00001d010398_P001	Maize	cytosol	79.26	81.13
EES18016	Sorghum	cytosol	80.18	80.56
HORVU3Hr1G092980.2	Barley	cytosol	84.33	74.09
GSMUA_Achr10P...	Banana	cytosol	67.74	65.04
GSMUA_Achr10P...	Banana	cytosol	71.43	64.05
GSMUA_Achr11P...	Banana	cytosol	64.52	55.34
KRH42697	Soybean	cytosol	57.14	52.1
KRH58804	Soybean	cytosol	56.22	51.69
KRH31533	Soybean	cytosol	55.76	49.79
VIT_05s0062g00780.t01	Wine grape	cytosol	55.76	48.99
KRG97381	Soybean	cytosol	55.3	48.98
Os06t0318300-02	Rice	cytosol	55.76	44.81
PGSC0003DMT400011652	Potato	cytosol	39.63	44.33
Solyc12g098650.1.1	Tomato	cytosol	39.63	43.43
Os02t0719000-01	Rice	cytosol	57.14	32.89

Protein Annotations

Gene3D:2.70.50.30	MapMan:27.4.4	EntrezGene:4324324	EMBL:AK071735	ProteinID:BAB90310.1	ProteinID:BAF07086.1
ProteinID:BAS75857.1	ProteinID:EEE55876.1	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	InterPro:IPR024792
InterPro:Ig_E-set	EnsemblPlantsGene:Os01g0913600	EnsemblPlants:Os01t0913600-01	PFAM:PF02115	PANTHER:PTHR10980	PANTHER:PTHR10980:SF20
UniProt:Q8S081	InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	SUPFAM:SSF81296	UniParc:UPI00000AB5E0	RefSeq:XP_015625033.1
SEG:seg	:	:	:	:	:

Description

Similar to Rho GDP-dissociation inhibitor 1 (Rho GDI-1) (AtRhoGDI1). (Os01t0913600-01)

Coordinates

chr1:-:39822035..39823763

Molecular Weight (calculated)

24834.0 Da

IEP (calculated)

4.238

GRAVY (calculated)

-0.753

Length

217 amino acids

Sequence
(BLAST)

001: MDSKDKEKEH EQTASGRNPD VNDVEEEEED EEGNKRAVVL GPQVPLKEQL ELDKDDESLR RWKEQLLGQV DTEQLGETAE PEVKVLNLTI LSPDRPDLVL
101: PIPFVPDEKG YAFALKDGST YSFRFSFIVS NNIVSGLKYT NTVWKTGVRV ENQKVMLGTF SPQLEPYTYE GEEETTPAGM FARGSYSAKL KFVDDDGKCY
201: LEMSYYFEIR KEWPTIQ

Best Arabidopsis Sequence Match ( AT3G07880.1 )
(BLAST)

001: MSLVSGARDM GFDDNNNNKN NKDGDDENSS SRTRADDDAL SRQMSESSLC ATEEEEDDDS KLQLGPQYTI KEHLEKDKDD ESLRKWKEQL LGSVDVTNIG
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL

Arabidopsis Description

GDI1Putative RHO GDP-dissociation inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q541X0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.