Factsheet for GSMUA_Achr10P03890_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	77.43	69.17
GSMUA_Achr10P...	Banana	cytosol	73.89	69.01
Os01t0913600-01	Rice	plasma membrane	65.04	67.74
Zm00001d010398_P001	Maize	cytosol	62.83	66.98
TraesCS3D01G414900.1	Wheat	cytosol	60.62	66.83
EES18012	Sorghum	cytosol	63.27	65.9
TraesCS3B01G454500.1	Wheat	cytosol	59.73	65.85
TraesCS3A01G419200.1	Wheat	cytosol	59.29	65.37
Zm00001d038046_P003	Maize	cytosol	60.62	63.72
KXG22740	Sorghum	cytosol	60.62	63.43
EES18016	Sorghum	cytosol	59.73	62.5
HORVU3Hr1G092980.2	Barley	cytosol	63.72	58.3
GSMUA_Achr9P12630_001	Banana	cytosol	57.96	55.04
KRH42697	Soybean	cytosol	57.52	54.62
TraesCS1A01G445800.1	Wheat	cytosol	56.19	54.51
KRH58804	Soybean	cytosol	55.75	53.39
GSMUA_Achr7P20430_001	Banana	cytosol	58.41	50.38
VIT_05s0062g00780.t01	Wine grape	cytosol	54.87	50.2
KRH31533	Soybean	cytosol	53.1	49.38
GSMUA_Achr5P04110_001	Banana	cytosol	57.52	49.24
KRG97381	Soybean	cytosol	53.1	48.98
PGSC0003DMT400011652	Potato	cytosol	40.27	46.91
Solyc12g098650.1.1	Tomato	cytosol	40.27	45.96
TraesCS1B01G480500.2	Wheat	cytosol, plastid	55.31	39.06
Zm00001d010397_P002	Maize	cytosol	28.76	38.46
TraesCS1D01G454500.1	Wheat	plastid	55.75	38.41
HORVU1Hr1G095170.3	Barley	cytosol, mitochondrion, nucleus	48.23	37.46
GSMUA_Achr5P21760_001	Banana	cytosol	38.5	37.34
GSMUA_Achr6P36650_001	Banana	mitochondrion	42.04	31.25

Protein Annotations

Gene3D:2.70.50.30	MapMan:27.4.4	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:GSMUA_Achr10G03890_001
EnsemblPlants:GSMUA_Achr10P03890_001	EnsemblPlants:GSMUA_Achr10T03890_001	InterPro:IPR024792	InterPro:Ig_E-set	UniProt:M0RF66	PFAM:PF02115
PRINTS:PR00492	PANTHER:PTHR10980	PANTHER:PTHR10980:SF30	InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	SUPFAM:SSF81296
UniParc:UPI000296EDF7	SEG:seg	:	:	:	:

Description

Rho GDP-dissociation inhibitor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G03890_001]

Coordinates

chr10:+:13417658..13418815

Molecular Weight (calculated)

25652.0 Da

IEP (calculated)

4.240

GRAVY (calculated)

-0.818

Length

226 amino acids

Sequence
(BLAST)

001: MEKDEQKEKQ PGEEQSGDAE EKMNRKLSCT TVDEDGGDED EEEKGPVELG PQIGLKEQLE MDKDDESLRK WKEQLLGSID LNEVGETLEP DVKIQDLTIL
101: APDRPDVVLP IPFVPDAKGF AFALKDGSRY RLKFTFTVSN NIVSGLRYTN TVWKTGMKVD STKVMLGTFS PQKEPYTYEL EEEATPAGYF ARGSYSAKTK
201: FVDDDGKCYL DMTYYFEIRK DWPTPA

Best Arabidopsis Sequence Match ( AT3G07880.1 )
(BLAST)

001: MSLVSGARDM GFDDNNNNKN NKDGDDENSS SRTRADDDAL SRQMSESSLC ATEEEEDDDS KLQLGPQYTI KEHLEKDKDD ESLRKWKEQL LGSVDVTNIG
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL

Arabidopsis Description

GDI1Putative RHO GDP-dissociation inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q541X0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.