Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31238 | Canola | cytosol | 27.65 | 68.87 |
| GSMUA_Achr9P12630_001 | Banana | cytosol | 61.36 | 68.07 |
| KRH14075 | Soybean | cytosol | 56.82 | 66.08 |
| GSMUA_Achr7P20430_001 | Banana | cytosol | 65.15 | 65.65 |
| Zm00001d051687_P001 | Maize | cytosol | 56.82 | 64.66 |
| VIT_00s0187g00210.t01 | Wine grape | cytosol | 55.68 | 63.36 |
| AT3G07880.1 | Thale cress | cytosol | 57.58 | 63.33 |
| Zm00001d017859_P002 | Maize | cytosol | 59.09 | 63.16 |
| KRH74038 | Soybean | cytosol | 55.68 | 63.09 |
| VIT_12s0059g00580.t01 | Wine grape | cytosol | 56.06 | 61.92 |
| Bra001274.1-P | Field mustard | cytosol | 49.24 | 61.32 |
| Bra040037.1-P | Field mustard | cytosol | 52.27 | 60.79 |
| Bra036660.1-P | Field mustard | cytosol | 50.38 | 60.73 |
| CDY28012 | Canola | cytosol | 56.82 | 60.73 |
| TraesCS6A01G282400.1 | Wheat | cytosol | 59.85 | 60.54 |
| CDY03276 | Canola | cytosol | 50.0 | 60.27 |
| CDY39796 | Canola | cytosol | 50.0 | 60.27 |
| TraesCS6D01G262900.1 | Wheat | cytosol | 59.47 | 60.15 |
| Solyc05g054110.2.1 | Tomato | cytosol | 53.03 | 60.09 |
| TraesCS6B01G310800.1 | Wheat | cytosol | 57.95 | 59.53 |
| CDY19551 | Canola | cytosol | 50.38 | 59.38 |
| CDY35970 | Canola | cytosol | 55.68 | 59.27 |
| Bra029684.1-P | Field mustard | cytosol | 55.68 | 59.27 |
| PGSC0003DMT400021800 | Potato | cytosol | 52.27 | 59.23 |
| CDY32048 | Canola | nucleus | 50.38 | 59.11 |
| Bra034515.1-P | Field mustard | nucleus | 50.38 | 59.11 |
| CDY12949 | Canola | cytosol | 50.0 | 58.93 |
| CDY08673 | Canola | cytosol | 50.0 | 58.93 |
| Bra027043.1-P | Field mustard | cytosol | 50.0 | 58.93 |
| AT1G62450.1 | Thale cress | cytosol | 49.24 | 58.3 |
| KRH01997 | Soybean | cytosol | 54.92 | 58.23 |
| KRH36543 | Soybean | cytosol | 54.55 | 58.06 |
| Solyc04g014760.2.1 | Tomato | nucleus | 53.41 | 58.02 |
| PGSC0003DMT400060556 | Potato | cytosol | 53.03 | 57.61 |
| CDY15966 | Canola | cytosol | 48.86 | 57.59 |
| GSMUA_Achr10P... | Banana | cytosol | 49.24 | 57.52 |
| KRH51157 | Soybean | cytosol | 54.17 | 57.43 |
| Os06t0318300-02 | Rice | cytosol | 58.71 | 57.41 |
| KRH11529 | Soybean | nucleus | 55.3 | 57.25 |
| Bra026994.1-P | Field mustard | cytosol | 48.48 | 57.14 |
| CDY26538 | Canola | cytosol | 48.48 | 57.14 |
| CDY62159 | Canola | cytosol | 48.11 | 56.7 |
| CDY53349 | Canola | cytosol | 48.11 | 56.7 |
| Bra019740.1-P | Field mustard | cytosol | 48.11 | 56.7 |
| AT1G12070.1 | Thale cress | cytosol | 47.73 | 56.5 |
| CDY21031 | Canola | cytosol | 47.73 | 56.5 |
| Bra016793.1-P | Field mustard | cytosol | 47.73 | 56.5 |
| OQU85511 | Sorghum | mitochondrion | 45.45 | 56.34 |
| Solyc11g012270.1.1 | Tomato | cytosol | 52.65 | 53.46 |
| PGSC0003DMT400034743 | Potato | cytosol | 51.89 | 52.69 |
| KXG19891 | Sorghum | cytosol | 55.68 | 51.94 |
| GSMUA_Achr11P... | Banana | cytosol | 49.24 | 51.38 |
| GSMUA_Achr10P... | Banana | cytosol | 45.08 | 49.17 |
| Os02t0719000-01 | Rice | cytosol | 58.33 | 40.85 |
| GSMUA_Achr5P21760_001 | Banana | cytosol | 35.23 | 39.91 |
| GSMUA_Achr6P36650_001 | Banana | mitochondrion | 39.39 | 34.21 |
Protein Annotations
| Gene3D:2.70.50.30 | MapMan:27.4.4 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0050790 | EnsemblPlantsGene:GSMUA_Achr5G04110_001 |
| EnsemblPlants:GSMUA_Achr5P04110_001 | EnsemblPlants:GSMUA_Achr5T04110_001 | InterPro:IPR024792 | InterPro:Ig_E-set | UniProt:M0SVJ0 | PFAM:PF02115 |
| PANTHER:PTHR10980 | PANTHER:PTHR10980:SF30 | InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI | SUPFAM:SSF81296 | UniParc:UPI0002969382 |
| SEG:seg | : | : | : | : | : |
Description
Rho GDP-dissociation inhibitor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G04110_001]
Coordinates
chr5:+:2942043..2944343
Molecular Weight (calculated)
29409.3 Da
IEP (calculated)
4.346
GRAVY (calculated)
-0.748
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAVGDLPG SRDMGLDQKR GKAEQNGILT VREGERESKS EHGRPGGEGG EGLDRRMSEI SLHATEEEEE EEDDEEEDGK GAKGLDLGPQ VSIKDQLEKD
101: KDDESLRKWK EQLLGSVDLN SVGENLEPEV TILCLSIISP GRADIVLPLP MVPNSKGVWF TLKEGSPYKL KFSFSVSNNI VSGLRYINTV WKTGVKMDRT
201: KEMLGTFSPQ LEPYTYETPE ETTPSGLFAR GSYSARTMFV DDDGKCYLEI NYTFDIRKEW APTD
101: KDDESLRKWK EQLLGSVDLN SVGENLEPEV TILCLSIISP GRADIVLPLP MVPNSKGVWF TLKEGSPYKL KFSFSVSNNI VSGLRYINTV WKTGVKMDRT
201: KEMLGTFSPQ LEPYTYETPE ETTPSGLFAR GSYSARTMFV DDDGKCYLEI NYTFDIRKEW APTD
001: MSLVSGARDM GFDDNNNNKN NKDGDDENSS SRTRADDDAL SRQMSESSLC ATEEEEDDDS KLQLGPQYTI KEHLEKDKDD ESLRKWKEQL LGSVDVTNIG
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL
Arabidopsis Description
GDI1Putative RHO GDP-dissociation inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q541X0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.