CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016793.1-P	Field mustard	cytosol	100.0	100.0
CDY31238	Canola	cytosol	46.64	98.11
CDY53349	Canola	cytosol	85.2	84.82
CDY26538	Canola	cytosol	84.75	84.38
CDY62159	Canola	cytosol	84.75	84.38
CDY15966	Canola	cytosol	84.3	83.93
AT1G12070.1	Thale cress	cytosol	83.86	83.86
CDY39796	Canola	cytosol	73.54	74.89
CDY03276	Canola	cytosol	72.65	73.97
CDY32048	Canola	nucleus	74.44	73.78
CDY08673	Canola	cytosol	72.65	72.32
CDY19551	Canola	cytosol	72.2	71.88
CDY12949	Canola	cytosol	71.75	71.43
CDY28012	Canola	cytosol	62.78	56.68
CDY35970	Canola	cytosol	61.88	55.65
Zm00001d051687_P001	Maize	cytosol	55.16	53.02
Zm00001d017859_P002	Maize	cytosol	56.05	50.61
TraesCS6B01G310800.1	Wheat	cytosol	57.4	49.81
GSMUA_Achr9P12630_001	Banana	cytosol	52.47	49.16
GSMUA_Achr7P20430_001	Banana	cytosol	56.5	48.09
TraesCS6A01G282400.1	Wheat	cytosol	56.05	47.89
GSMUA_Achr5P04110_001	Banana	cytosol	56.5	47.73
TraesCS6D01G262900.1	Wheat	cytosol	55.61	47.51
OQU85511	Sorghum	mitochondrion	44.84	46.95
Os06t0318300-02	Rice	cytosol	54.71	45.19
KXG19891	Sorghum	cytosol	55.61	43.82
Os02t0719000-01	Rice	cytosol	55.16	32.63

Protein Annotations

Gene3D:2.70.50.30	MapMan:27.4.4	GO:A0A078G6H7	UniProt:A0A078G6H7	EnsemblPlants:CDY21031	ProteinID:CDY21031
ProteinID:CDY21031.1	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00015194001	InterPro:IPR024792
InterPro:Ig_E-set	PFAM:PF02115	PANTHER:PTHR10980	PANTHER:PTHR10980:SF30	InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI
SUPFAM:SSF81296	UniParc:UPI000254621A	SEG:seg	:	:	:

Description

BnaA08g24940DBnaA08g24940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6H7]

Coordinates

chrLK032115:-:374055..375760

Molecular Weight (calculated)

25612.1 Da

IEP (calculated)

4.847

GRAVY (calculated)

-0.820

Length

223 amino acids

Sequence
(BLAST)

001: MGLKDEDKKI EKSSEEPMGH GTLSRNNSHS SLSPTEDDED EDKNLELGPM IALREQLEKD KDDESLRRWK EQLLGIVDLE EVGETTDPVV KIMNLTIRSP
101: DRDDMVLTIP ENGKPTSKGP WFTLKEGSKY TLVFTFRVNN NIVSGLRYSN TVWKTGIKVY SRKQMLGTFS PQAEPYNHVM FEESTPSGML VRGSYSVKSK
201: FVDDDNKCYL ENNYTFDIRK NWL

Best Arabidopsis Sequence Match ( AT1G12070.1 )
(BLAST)

001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL

Arabidopsis Description

At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.