Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026994.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY15966 | Canola | cytosol | 99.11 | 99.11 |
| CDY31238 | Canola | cytosol | 45.09 | 95.28 |
| CDY53349 | Canola | cytosol | 90.18 | 90.18 |
| CDY62159 | Canola | cytosol | 89.73 | 89.73 |
| AT1G12070.1 | Thale cress | cytosol | 86.61 | 87.0 |
| CDY21031 | Canola | cytosol | 84.38 | 84.75 |
| CDY39796 | Canola | cytosol | 73.66 | 75.34 |
| CDY19551 | Canola | cytosol | 75.0 | 75.0 |
| CDY03276 | Canola | cytosol | 73.21 | 74.89 |
| CDY32048 | Canola | nucleus | 75.0 | 74.67 |
| CDY12949 | Canola | cytosol | 74.55 | 74.55 |
| CDY08673 | Canola | cytosol | 74.11 | 74.11 |
| CDY28012 | Canola | cytosol | 62.5 | 56.68 |
| CDY35970 | Canola | cytosol | 61.16 | 55.24 |
| Zm00001d051687_P001 | Maize | cytosol | 55.36 | 53.45 |
| Zm00001d017859_P002 | Maize | cytosol | 57.59 | 52.23 |
| GSMUA_Achr9P12630_001 | Banana | cytosol | 54.91 | 51.68 |
| TraesCS6B01G310800.1 | Wheat | cytosol | 57.59 | 50.19 |
| TraesCS6A01G282400.1 | Wheat | cytosol | 57.59 | 49.43 |
| GSMUA_Achr5P04110_001 | Banana | cytosol | 57.14 | 48.48 |
| TraesCS6D01G262900.1 | Wheat | cytosol | 55.36 | 47.51 |
| GSMUA_Achr7P20430_001 | Banana | cytosol | 55.36 | 47.33 |
| OQU85511 | Sorghum | mitochondrion | 44.2 | 46.48 |
| KXG19891 | Sorghum | cytosol | 58.04 | 45.94 |
| Os06t0318300-02 | Rice | cytosol | 53.57 | 44.44 |
| Os02t0719000-01 | Rice | cytosol | 57.14 | 33.95 |
Protein Annotations
| Gene3D:2.70.50.30 | MapMan:27.4.4 | GO:A0A078GPJ4 | UniProt:A0A078GPJ4 | EnsemblPlants:CDY26538 | ProteinID:CDY26538 |
| ProteinID:CDY26538.1 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0050790 | EnsemblPlantsGene:GSBRNA2T00035395001 | InterPro:IPR024792 |
| InterPro:Ig_E-set | PFAM:PF02115 | PANTHER:PTHR10980 | PANTHER:PTHR10980:SF30 | InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI |
| SUPFAM:SSF81296 | UniParc:UPI0002542908 | SEG:seg | : | : | : |
Description
BnaA09g47390DBnaA09g47390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPJ4]
Coordinates
chrLK032192:-:8837..10446
Molecular Weight (calculated)
25776.3 Da
IEP (calculated)
4.659
GRAVY (calculated)
-0.852
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLKEEEKKA EETSEDQKGK GTLSRKNSHS SLCPTDDDDE DEDRKLELGP MIALKEQLEK DKDDESLRRW KEQLLGSVDM EDVGETPDPV VKIMYLTIRS
101: PDREDMVLTV PEDGNPTSKG PWFTLKEGSK YTLVFTFRVT NNIVSGLRYS NSVWKTGLKV YSRKEMLGTF SPQAEPYTHV MFEESTPSGM LVRGSYSVKS
201: KFVDDDNKCY LENNYTFDIR KNWL
101: PDREDMVLTV PEDGNPTSKG PWFTLKEGSK YTLVFTFRVT NNIVSGLRYS NSVWKTGLKV YSRKEMLGTF SPQAEPYTHV MFEESTPSGM LVRGSYSVKS
201: KFVDDDNKCY LENNYTFDIR KNWL
001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
Arabidopsis Description
At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.