Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21031 | Canola | cytosol | 98.11 | 46.64 |
| CDY15966 | Canola | cytosol | 95.28 | 45.09 |
| CDY26538 | Canola | cytosol | 95.28 | 45.09 |
| CDY62159 | Canola | cytosol | 94.34 | 44.64 |
| CDY53349 | Canola | cytosol | 94.34 | 44.64 |
| AT1G12070.1 | Thale cress | cytosol | 91.51 | 43.5 |
| CDY39796 | Canola | cytosol | 82.08 | 39.73 |
| CDY03276 | Canola | cytosol | 81.13 | 39.27 |
| CDY19551 | Canola | cytosol | 81.13 | 38.39 |
| CDY12949 | Canola | cytosol | 81.13 | 38.39 |
| CDY08673 | Canola | cytosol | 81.13 | 38.39 |
| CDY32048 | Canola | nucleus | 81.13 | 38.22 |
| OQU85511 | Sorghum | mitochondrion | 70.75 | 35.21 |
| CDY28012 | Canola | cytosol | 76.42 | 32.79 |
| CDY35970 | Canola | cytosol | 75.47 | 32.26 |
| Zm00001d051687_P001 | Maize | cytosol | 68.87 | 31.47 |
| Zm00001d017859_P002 | Maize | cytosol | 70.75 | 30.36 |
| TraesCS6B01G310800.1 | Wheat | cytosol | 73.58 | 30.35 |
| TraesCS6A01G282400.1 | Wheat | cytosol | 73.58 | 29.89 |
| TraesCS6D01G262900.1 | Wheat | cytosol | 73.58 | 29.89 |
| GSMUA_Achr9P12630_001 | Banana | cytosol | 65.09 | 28.99 |
| Os06t0318300-02 | Rice | cytosol | 71.7 | 28.15 |
| GSMUA_Achr7P20430_001 | Banana | cytosol | 68.87 | 27.86 |
| GSMUA_Achr5P04110_001 | Banana | cytosol | 68.87 | 27.65 |
| KXG19891 | Sorghum | cytosol | 67.92 | 25.44 |
| Os02t0719000-01 | Rice | cytosol | 72.64 | 20.42 |
Protein Annotations
| Gene3D:2.70.50.30 | MapMan:27.4.4 | GO:A0A078H311 | UniProt:A0A078H311 | EnsemblPlants:CDY31238 | ProteinID:CDY31238 |
| ProteinID:CDY31238.1 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0050790 | EnsemblPlantsGene:GSBRNA2T00047376001 | InterPro:IPR024792 |
| InterPro:Ig_E-set | PFAM:PF02115 | PRINTS:PR00492 | PANTHER:PTHR10980 | PANTHER:PTHR10980:SF30 | InterPro:RhoGDI_dom_sf |
| InterPro:Rho_GDI | SUPFAM:SSF81296 | UniParc:UPI0004EB3090 | : | : | : |
Description
BnaC08g15330DBnaC08g15330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H311]
Coordinates
chrLK032269:-:139008..139796
Molecular Weight (calculated)
12429.8 Da
IEP (calculated)
9.790
GRAVY (calculated)
-0.458
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPWFTLKEG SKYTLVFTFR VTNNIVSGLR YSNTVWKTGI KVYSRKQMLG TFSPQAEPYN HVMFEESTPS GMLVRGSYSV KSKFVDDDNK CYLENNYTFD
101: IRKNWL
101: IRKNWL
001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
Arabidopsis Description
At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.