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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26538 Canola cytosol 99.11 99.11
CDY31238 Canola cytosol 45.09 95.28
CDY53349 Canola cytosol 90.18 90.18
CDY62159 Canola cytosol 89.73 89.73
AT1G12070.1 Thale cress cytosol 87.5 87.89
CDY21031 Canola cytosol 83.93 84.3
CDY19551 Canola cytosol 75.45 75.45
CDY12949 Canola cytosol 75.0 75.0
CDY39796 Canola cytosol 73.21 74.89
CDY03276 Canola cytosol 72.77 74.43
CDY32048 Canola nucleus 74.55 74.22
CDY08673 Canola cytosol 73.66 73.66
CDY28012 Canola cytosol 62.5 56.68
CDY35970 Canola cytosol 61.16 55.24
Zm00001d051687_P001 Maize cytosol 55.36 53.45
Zm00001d017859_P002 Maize cytosol 58.04 52.63
GSMUA_Achr9P12630_001 Banana cytosol 54.91 51.68
TraesCS6B01G310800.1 Wheat cytosol 57.59 50.19
TraesCS6A01G282400.1 Wheat cytosol 57.59 49.43
GSMUA_Achr5P04110_001 Banana cytosol 57.59 48.86
GSMUA_Achr7P20430_001 Banana cytosol 55.8 47.71
TraesCS6D01G262900.1 Wheat cytosol 55.36 47.51
OQU85511 Sorghum mitochondrion 44.2 46.48
KXG19891 Sorghum cytosol 58.48 46.29
Os06t0318300-02 Rice cytosol 53.57 44.44
Os02t0719000-01 Rice cytosol 57.14 33.95
Protein Annotations
Gene3D:2.70.50.30MapMan:27.4.4GO:A0A078FS70UniProt:A0A078FS70EnsemblPlants:CDY15966ProteinID:CDY15966
ProteinID:CDY15966.1GO:GO:0003674GO:GO:0005094GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0008150GO:GO:0030234GO:GO:0050790EnsemblPlantsGene:GSBRNA2T00090348001InterPro:IPR024792
InterPro:Ig_E-setPFAM:PF02115PANTHER:PTHR10980PANTHER:PTHR10980:SF30InterPro:RhoGDI_dom_sfInterPro:Rho_GDI
SUPFAM:SSF81296UniParc:UPI0004EDD11DSEG:seg:::
Description
BnaC08g41570DBnaC08g41570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FS70]
Coordinates
chrLK032060:-:12284..13942
Molecular Weight (calculated)
25718.2 Da
IEP (calculated)
4.659
GRAVY (calculated)
-0.838
Length
224 amino acids
Sequence
(BLAST)
001: MVLKEEEKKA EETSEDQKGK GTLSRKNSHS SLCPTDDDDE DEDKKLELGP MIALKEQLEK DKDDESLRRW KEQLLGSVDM EDVGETPDPV VKIMYLTIRS
101: PDREDMVLTV PEDGNPASKG PWFTLKEGSK YTLVFTFRVT NNIVSGLRYS NSVWKTGLKV YSRKEMLGTF SPQAEPYTHV MFEESTPSGM LVRGSYSVKS
201: KFVDDDNKCY LENNYTFDIR KNWL
Best Arabidopsis Sequence Match ( AT1G12070.1 )
(BLAST)
001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
Arabidopsis Description
At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.