CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027043.1-P	Field mustard	cytosol	99.55	99.55
CDY12949	Canola	cytosol	99.55	99.55
CDY32048	Canola	nucleus	91.96	91.56
CDY39796	Canola	cytosol	88.39	90.41
CDY08673	Canola	cytosol	89.73	89.73
CDY03276	Canola	cytosol	87.05	89.04
AT1G62450.1	Thale cress	cytosol	88.39	88.79
CDY31238	Canola	cytosol	38.39	81.13
CDY15966	Canola	cytosol	75.45	75.45
CDY26538	Canola	cytosol	75.0	75.0
CDY53349	Canola	cytosol	74.55	74.55
CDY62159	Canola	cytosol	74.55	74.55
CDY21031	Canola	cytosol	71.88	72.2
CDY28012	Canola	cytosol	62.95	57.09
CDY35970	Canola	cytosol	62.5	56.45
GSMUA_Achr9P12630_001	Banana	cytosol	57.59	54.2
Zm00001d017859_P002	Maize	cytosol	58.48	53.04
Zm00001d051687_P001	Maize	cytosol	54.46	52.59
GSMUA_Achr7P20430_001	Banana	cytosol	59.38	50.76
GSMUA_Achr5P04110_001	Banana	cytosol	59.38	50.38
TraesCS6B01G310800.1	Wheat	cytosol	57.14	49.81
TraesCS6A01G282400.1	Wheat	cytosol	57.14	49.04
TraesCS6D01G262900.1	Wheat	cytosol	57.14	49.04
OQU85511	Sorghum	mitochondrion	45.54	47.89
KXG19891	Sorghum	cytosol	58.04	45.94
Os06t0318300-02	Rice	cytosol	53.12	44.07
Os02t0719000-01	Rice	cytosol	58.48	34.75

Protein Annotations

Gene3D:2.70.50.30	MapMan:27.4.4	GO:A0A078G2N8	UniProt:A0A078G2N8	EnsemblPlants:CDY19551	ProteinID:CDY19551
ProteinID:CDY19551.1	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00009191001	InterPro:IPR024792
InterPro:Ig_E-set	PFAM:PF02115	PRINTS:PR00492	PANTHER:PTHR10980	PANTHER:PTHR10980:SF30	InterPro:RhoGDI_dom_sf
InterPro:Rho_GDI	SUPFAM:SSF81296	UniParc:UPI0004EED9E0	SEG:seg	:	:

Description

BnaC09g13520DBnaC09g13520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2N8]

Coordinates

chrLK032097:-:592715..595469

Molecular Weight (calculated)

25429.7 Da

IEP (calculated)

4.421

GRAVY (calculated)

-0.829

Length

224 amino acids

Sequence
(BLAST)

001: MELEDEKKGG EASGQTSDKE MGLSRKNSDS SLSPTEDDDE DEEKKPQLGP MIALKEQLEK DKDDESLRRW KEQLIGVVDL EDVGETPDPV VKILDLTVRS
101: PNREDMVLTI PDDGLPNPKG PWFTIKEGSK YTLVFNFRVT NNIVSGLRYN NTVWKTGVKV DSTKAMLGTF SPQAEPYQHV MPEEITPSGI FARGSYSART
201: KFIDDDNKCY LEINYTFDIR KNWQ

Best Arabidopsis Sequence Match ( AT1G62450.1 )
(BLAST)

001: MVLEDEMKKG EASGETSEKM GLSRKNSGSS LSPTEDDEED EDKKLELGPM IALKEQLERD KDDESLRRWK EQLLGVVDLE DVGETPDPVV KILDLTIRSP
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ

Arabidopsis Description

Immunoglobulin E-set superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.