Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034515.1-P | Field mustard | nucleus | 97.32 | 96.89 |
| CDY32048 | Canola | nucleus | 96.88 | 96.44 |
| CDY03276 | Canola | cytosol | 91.52 | 93.61 |
| CDY39796 | Canola | cytosol | 91.52 | 93.61 |
| CDY19551 | Canola | cytosol | 89.73 | 89.73 |
| CDY12949 | Canola | cytosol | 89.29 | 89.29 |
| AT1G62450.1 | Thale cress | cytosol | 85.71 | 86.1 |
| CDY31238 | Canola | cytosol | 38.39 | 81.13 |
| CDY26538 | Canola | cytosol | 74.11 | 74.11 |
| CDY15966 | Canola | cytosol | 73.66 | 73.66 |
| CDY53349 | Canola | cytosol | 73.21 | 73.21 |
| CDY62159 | Canola | cytosol | 73.21 | 73.21 |
| CDY21031 | Canola | cytosol | 72.32 | 72.65 |
| CDY28012 | Canola | cytosol | 62.95 | 57.09 |
| CDY35970 | Canola | cytosol | 62.95 | 56.85 |
| GSMUA_Achr9P12630_001 | Banana | cytosol | 58.48 | 55.04 |
| Zm00001d051687_P001 | Maize | cytosol | 54.46 | 52.59 |
| Zm00001d017859_P002 | Maize | cytosol | 57.14 | 51.82 |
| GSMUA_Achr7P20430_001 | Banana | cytosol | 60.27 | 51.53 |
| GSMUA_Achr5P04110_001 | Banana | cytosol | 58.93 | 50.0 |
| TraesCS6B01G310800.1 | Wheat | cytosol | 56.25 | 49.03 |
| TraesCS6A01G282400.1 | Wheat | cytosol | 56.7 | 48.66 |
| TraesCS6D01G262900.1 | Wheat | cytosol | 55.8 | 47.89 |
| OQU85511 | Sorghum | mitochondrion | 44.64 | 46.95 |
| KXG19891 | Sorghum | cytosol | 58.48 | 46.29 |
| Os06t0318300-02 | Rice | cytosol | 54.02 | 44.81 |
| Os02t0719000-01 | Rice | cytosol | 57.59 | 34.22 |
Protein Annotations
| Gene3D:2.70.50.30 | MapMan:27.4.4 | GO:A0A078FA45 | UniProt:A0A078FA45 | EnsemblPlants:CDY08673 | ProteinID:CDY08673 |
| ProteinID:CDY08673.1 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0050790 | EnsemblPlantsGene:GSBRNA2T00000518001 | InterPro:IPR024792 |
| InterPro:Ig_E-set | PFAM:PF02115 | PRINTS:PR00492 | PANTHER:PTHR10980 | PANTHER:PTHR10980:SF30 | InterPro:RhoGDI_dom_sf |
| InterPro:Rho_GDI | SUPFAM:SSF81296 | UniParc:UPI0004EB08C6 | SEG:seg | : | : |
Description
BnaC04g19820DBnaC04g19820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA45]
Coordinates
chrLK031987:-:802536..804065
Molecular Weight (calculated)
25574.8 Da
IEP (calculated)
4.488
GRAVY (calculated)
-0.873
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLEDEKKGG EASGETSDRE NRLSRMNSES SLSPTEEDDD DEDRKPELGP MIALKEQLEK DKDDESLKRW KEQLIGVVDF EDVGETPDPV VKILHLKIRS
101: PDRDEMVLTI PDDGVPNPKS PWFTIKEGSK YTLVFNFRVT NNIVSGLRYN NTVWKTGVKV DSTKAMLGTF SPQAEPYQHV MPEETTPSGI FARGSYSART
201: KFIDDDNKCY LEINYTFDIR KNWQ
101: PDRDEMVLTI PDDGVPNPKS PWFTIKEGSK YTLVFNFRVT NNIVSGLRYN NTVWKTGVKV DSTKAMLGTF SPQAEPYQHV MPEETTPSGI FARGSYSART
201: KFIDDDNKCY LEINYTFDIR KNWQ
001: MVLEDEMKKG EASGETSEKM GLSRKNSGSS LSPTEDDEED EDKKLELGPM IALKEQLERD KDDESLRRWK EQLLGVVDLE DVGETPDPVV KILDLTIRSP
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ
Arabidopsis Description
Immunoglobulin E-set superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.