CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034515.1-P	Field mustard	nucleus	99.56	99.56
CDY08673	Canola	cytosol	96.44	96.88
CDY39796	Canola	cytosol	92.44	94.98
CDY03276	Canola	cytosol	91.56	94.06
CDY19551	Canola	cytosol	91.56	91.96
CDY12949	Canola	cytosol	91.11	91.52
AT1G62450.1	Thale cress	cytosol	87.11	87.89
CDY31238	Canola	cytosol	38.22	81.13
CDY26538	Canola	cytosol	74.67	75.0
CDY15966	Canola	cytosol	74.22	74.55
CDY21031	Canola	cytosol	73.78	74.44
CDY53349	Canola	cytosol	73.78	74.11
CDY62159	Canola	cytosol	73.78	74.11
CDY28012	Canola	cytosol	63.56	57.89
CDY35970	Canola	cytosol	63.11	57.26
GSMUA_Achr9P12630_001	Banana	cytosol	58.22	55.04
Zm00001d051687_P001	Maize	cytosol	54.67	53.02
Zm00001d017859_P002	Maize	cytosol	57.33	52.23
GSMUA_Achr7P20430_001	Banana	cytosol	60.44	51.91
GSMUA_Achr5P04110_001	Banana	cytosol	59.11	50.38
TraesCS6B01G310800.1	Wheat	cytosol	56.89	49.81
TraesCS6A01G282400.1	Wheat	cytosol	56.89	49.04
TraesCS6D01G262900.1	Wheat	cytosol	56.44	48.66
OQU85511	Sorghum	mitochondrion	44.89	47.42
KXG19891	Sorghum	cytosol	57.78	45.94
Os06t0318300-02	Rice	cytosol	53.78	44.81
Os02t0719000-01	Rice	cytosol	58.22	34.75

Protein Annotations

Gene3D:2.70.50.30	MapMan:27.4.4	GO:A0A078H5F9	UniProt:A0A078H5F9	EnsemblPlants:CDY32048	ProteinID:CDY32048
ProteinID:CDY32048.1	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00051331001	InterPro:IPR024792
InterPro:Ig_E-set	PFAM:PF02115	PRINTS:PR00492	PANTHER:PTHR10980	PANTHER:PTHR10980:SF30	InterPro:RhoGDI_dom_sf
InterPro:Rho_GDI	SUPFAM:SSF81296	UniParc:UPI0004EDF990	SEG:seg	:	:

Description

BnaA03g60520DBnaA03g60520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5F9]

Coordinates

chrLK032285:-:246721..248232

Molecular Weight (calculated)

25588.7 Da

IEP (calculated)

4.395

GRAVY (calculated)

-0.865

Length

225 amino acids

Sequence
(BLAST)

001: MGLEDEKKGG EASGETSDRE NRLSRMNSES SLSPTEDDDD DDEDRKPELG PMIALKEQLE KDKDDESLRR WKEQLIGVVD LEDVGETSDP VVKILHLTVR
101: SPDRDEMVLT IPDDGVPNPK GPWFTIKEGS KYTLVFNFRV TNNIVSGLRY NNTVWKTGVK VDSTKAMLGT FSPQAEPYQH VMPEETTPSG IFARGSYSAR
201: TKFIDDDNKC YLEINYTFDI RKNWQ

Best Arabidopsis Sequence Match ( AT1G62450.1 )
(BLAST)

001: MVLEDEMKKG EASGETSEKM GLSRKNSGSS LSPTEDDEED EDKKLELGPM IALKEQLERD KDDESLRRWK EQLLGVVDLE DVGETPDPVV KILDLTIRSP
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ

Arabidopsis Description

Immunoglobulin E-set superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.