Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P12630_001 | Banana | cytosol | 64.89 | 71.43 |
| CDY31238 | Canola | cytosol | 27.86 | 68.87 |
| Zm00001d051687_P001 | Maize | cytosol | 60.69 | 68.53 |
| Bra001274.1-P | Field mustard | cytosol | 53.05 | 65.57 |
| KRH14075 | Soybean | cytosol | 56.49 | 65.2 |
| GSMUA_Achr5P04110_001 | Banana | cytosol | 65.65 | 65.15 |
| Bra040037.1-P | Field mustard | cytosol | 56.11 | 64.76 |
| Zm00001d017859_P002 | Maize | cytosol | 60.69 | 64.37 |
| TraesCS6D01G262900.1 | Wheat | cytosol | 63.36 | 63.6 |
| KRH74038 | Soybean | cytosol | 56.11 | 63.09 |
| TraesCS6A01G282400.1 | Wheat | cytosol | 62.6 | 62.84 |
| VIT_00s0187g00210.t01 | Wine grape | cytosol | 55.34 | 62.5 |
| PGSC0003DMT400021800 | Potato | cytosol | 55.34 | 62.23 |
| Bra036660.1-P | Field mustard | cytosol | 51.91 | 62.1 |
| Solyc05g054110.2.1 | Tomato | cytosol | 54.96 | 61.8 |
| AT3G07880.1 | Thale cress | cytosol | 56.49 | 61.67 |
| CDY39796 | Canola | cytosol | 51.53 | 61.64 |
| AT1G62450.1 | Thale cress | cytosol | 52.29 | 61.44 |
| PGSC0003DMT400060556 | Potato | cytosol | 56.87 | 61.32 |
| CDY03276 | Canola | cytosol | 51.15 | 61.19 |
| Solyc04g014760.2.1 | Tomato | nucleus | 56.49 | 60.91 |
| VIT_12s0059g00580.t01 | Wine grape | cytosol | 55.34 | 60.67 |
| CDY35970 | Canola | cytosol | 57.25 | 60.48 |
| Bra029684.1-P | Field mustard | cytosol | 57.25 | 60.48 |
| CDY32048 | Canola | nucleus | 51.91 | 60.44 |
| Bra034515.1-P | Field mustard | nucleus | 51.91 | 60.44 |
| CDY08673 | Canola | cytosol | 51.53 | 60.27 |
| CDY28012 | Canola | cytosol | 56.49 | 59.92 |
| TraesCS6B01G310800.1 | Wheat | cytosol | 58.4 | 59.53 |
| CDY19551 | Canola | cytosol | 50.76 | 59.38 |
| KRH36543 | Soybean | cytosol | 56.11 | 59.27 |
| KRH11529 | Soybean | nucleus | 57.63 | 59.22 |
| OQU85511 | Sorghum | mitochondrion | 48.09 | 59.15 |
| Bra027043.1-P | Field mustard | cytosol | 50.38 | 58.93 |
| CDY12949 | Canola | cytosol | 50.38 | 58.93 |
| GSMUA_Achr10P... | Banana | cytosol | 50.38 | 58.41 |
| AT1G12070.1 | Thale cress | cytosol | 49.24 | 57.85 |
| KRH51157 | Soybean | cytosol | 54.96 | 57.83 |
| Solyc11g012270.1.1 | Tomato | cytosol | 57.25 | 57.69 |
| KRH01997 | Soybean | cytosol | 54.58 | 57.43 |
| Bra019740.1-P | Field mustard | cytosol | 48.85 | 57.14 |
| CDY53349 | Canola | cytosol | 48.85 | 57.14 |
| CDY62159 | Canola | cytosol | 48.85 | 57.14 |
| Os06t0318300-02 | Rice | cytosol | 58.78 | 57.04 |
| PGSC0003DMT400034743 | Potato | cytosol | 56.49 | 56.92 |
| Bra016793.1-P | Field mustard | cytosol | 48.09 | 56.5 |
| CDY21031 | Canola | cytosol | 48.09 | 56.5 |
| CDY15966 | Canola | cytosol | 47.71 | 55.8 |
| CDY26538 | Canola | cytosol | 47.33 | 55.36 |
| Bra026994.1-P | Field mustard | cytosol | 47.33 | 55.36 |
| KXG19891 | Sorghum | cytosol | 59.54 | 55.12 |
| GSMUA_Achr10P... | Banana | cytosol | 49.62 | 53.72 |
| GSMUA_Achr11P... | Banana | cytosol | 49.62 | 51.38 |
| Os02t0719000-01 | Rice | cytosol | 61.45 | 42.71 |
| GSMUA_Achr5P21760_001 | Banana | cytosol | 35.5 | 39.91 |
| GSMUA_Achr6P36650_001 | Banana | mitochondrion | 39.69 | 34.21 |
Protein Annotations
| Gene3D:2.70.50.30 | MapMan:27.4.4 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0050790 | EnsemblPlantsGene:GSMUA_Achr7G20430_001 |
| EnsemblPlants:GSMUA_Achr7P20430_001 | EnsemblPlants:GSMUA_Achr7T20430_001 | InterPro:IPR024792 | InterPro:Ig_E-set | UniProt:M0TJ80 | PFAM:PF02115 |
| PRINTS:PR00492 | PANTHER:PTHR10980 | PANTHER:PTHR10980:SF30 | InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI | SUPFAM:SSF81296 |
| UniParc:UPI0002962123 | SEG:seg | : | : | : | : |
Description
Rho GDP-dissociation inhibitor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G20430_001]
Coordinates
chr7:-:23569332..23571517
Molecular Weight (calculated)
29268.3 Da
IEP (calculated)
4.424
GRAVY (calculated)
-0.696
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVTGALSS SKMLGLEDSG EIAEKGAILM GKEGEEEQKR VNGHDSEEAG EEERLNRQMS EMSLYGTEEE EEEDEEGKGA KGIELGPRVS LKTEIEKDKD
101: DDSLRRWKEQ LLGSVDLNSV GENLEPEVKI LSLSILSPGR PDIVLPLPVV PNSKGVWFTL KEGSHYRLKF AFAVSNNIVS GLRYTNTVWK TGVKVERTKE
201: MLGTFSPQPE PYTYETPEET TPSGLFARGS YSARTKFVDD DGKCYLEINY SFDIRREWPS TG
101: DDSLRRWKEQ LLGSVDLNSV GENLEPEVKI LSLSILSPGR PDIVLPLPVV PNSKGVWFTL KEGSHYRLKF AFAVSNNIVS GLRYTNTVWK TGVKVERTKE
201: MLGTFSPQPE PYTYETPEET TPSGLFARGS YSARTKFVDD DGKCYLEINY SFDIRREWPS TG
001: MSLVSGARDM GFDDNNNNKN NKDGDDENSS SRTRADDDAL SRQMSESSLC ATEEEEDDDS KLQLGPQYTI KEHLEKDKDD ESLRKWKEQL LGSVDVTNIG
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL
Arabidopsis Description
GDI1Putative RHO GDP-dissociation inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q541X0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.