Factsheet for GSMUA_Achr11P08680_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	69.17	77.43
GSMUA_Achr10P...	Banana	cytosol	66.01	69.01
TraesCS3D01G414900.1	Wheat	cytosol	52.96	65.37
Zm00001d010398_P001	Maize	cytosol	54.15	64.62
Os01t0913600-01	Rice	plasma membrane	55.34	64.52
TraesCS3B01G454500.1	Wheat	cytosol	52.17	64.39
TraesCS3A01G419200.1	Wheat	cytosol	51.78	63.9
EES18016	Sorghum	cytosol	53.75	62.96
KXG22740	Sorghum	cytosol	53.36	62.5
Zm00001d038046_P003	Maize	cytosol	52.57	61.86
EES18012	Sorghum	cytosol	52.96	61.75
HORVU3Hr1G092980.2	Barley	cytosol	56.92	58.3
KRH42697	Soybean	cytosol	51.38	54.62
KRH58804	Soybean	cytosol	49.8	53.39
GSMUA_Achr9P12630_001	Banana	cytosol	49.8	52.94
TraesCS1A01G445800.1	Wheat	cytosol	48.62	52.79
VIT_05s0062g00780.t01	Wine grape	cytosol	49.41	50.61
GSMUA_Achr7P20430_001	Banana	cytosol	51.38	49.62
KRH31533	Soybean	cytosol	47.43	49.38
GSMUA_Achr5P04110_001	Banana	cytosol	51.38	49.24
KRG97381	Soybean	cytosol	47.43	48.98
PGSC0003DMT400011652	Potato	cytosol	36.36	47.42
Solyc12g098650.1.1	Tomato	cytosol	36.36	46.46
Zm00001d010397_P002	Maize	cytosol	27.27	40.83
TraesCS1B01G480500.2	Wheat	cytosol, plastid	49.8	39.38
HORVU1Hr1G095170.3	Barley	cytosol, mitochondrion, nucleus	43.87	38.14
TraesCS1D01G454500.1	Wheat	plastid	49.41	38.11
GSMUA_Achr5P21760_001	Banana	cytosol	33.99	36.91
GSMUA_Achr6P36650_001	Banana	mitochondrion	35.57	29.61

Protein Annotations

Gene3D:2.70.50.30	MapMan:27.4.4	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:GSMUA_Achr11G08680_001
EnsemblPlants:GSMUA_Achr11P08680_001	EnsemblPlants:GSMUA_Achr11T08680_001	InterPro:IPR024792	InterPro:Ig_E-set	UniProt:M0RQJ8	PFAM:PF02115
PRINTS:PR00492	PANTHER:PTHR10980	PANTHER:PTHR10980:SF30	InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	SUPFAM:SSF81296
UniParc:UPI000296E2EB	SEG:seg	:	:	:	:

Description

Rho GDP-dissociation inhibitor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G08680_001]

Coordinates

chr11:+:6711755..6713517

Molecular Weight (calculated)

28894.9 Da

IEP (calculated)

4.701

GRAVY (calculated)

-0.769

Length

253 amino acids

Sequence
(BLAST)

001: MPINCHPKTR RERARERERE TVAPRPPSVM DRRYEASSEV EGKISRKPSC ASLASNDEDY VGGDEEDDDE KRAVLLGPQI ALKEQIEMDK DDESLRKWKE
101: QLLGSIDLNE VGETLDPDVR IQDLTILTSE RSDLVLPIPF VPDAKGFAFA LKDGSRYRLK FSFTVSNNIV SGLRYTNTVW KTGMKVDSTK VMLGTFSPQK
201: EPYTYELEEE TTPGGYFARG SYSARTKFVD DDGKCYLDMS YYFEIRKDWP TPA

Best Arabidopsis Sequence Match ( AT3G07880.1 )
(BLAST)

001: MSLVSGARDM GFDDNNNNKN NKDGDDENSS SRTRADDDAL SRQMSESSLC ATEEEEDDDS KLQLGPQYTI KEHLEKDKDD ESLRKWKEQL LGSVDVTNIG
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL

Arabidopsis Description

GDI1Putative RHO GDP-dissociation inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q541X0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.