Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010398_P001 | Maize | cytosol | 48.52 | 38.68 |
| Zm00001d038046_P003 | Maize | cytosol | 46.15 | 36.28 |
| GSMUA_Achr10P... | Banana | cytosol | 38.46 | 28.76 |
| GSMUA_Achr10P... | Banana | cytosol | 40.24 | 28.1 |
| GSMUA_Achr11P... | Banana | cytosol | 40.83 | 27.27 |
| Zm00001d051687_P001 | Maize | cytosol | 34.32 | 25.0 |
| VIT_05s0062g00780.t01 | Wine grape | cytosol | 34.91 | 23.89 |
| Zm00001d017859_P002 | Maize | cytosol | 34.91 | 23.89 |
| KRH58804 | Soybean | cytosol | 33.14 | 23.73 |
| KRH42697 | Soybean | cytosol | 32.54 | 23.11 |
| KRH31533 | Soybean | cytosol | 30.18 | 20.99 |
| KRG97381 | Soybean | cytosol | 30.18 | 20.82 |
| PGSC0003DMT400011652 | Potato | cytosol | 20.12 | 17.53 |
| Solyc12g098650.1.1 | Tomato | cytosol | 20.12 | 17.17 |
Protein Annotations
| Gene3D:2.70.50.30 | MapMan:35.2 | UniProt:A0A1D6FQS0 | ProteinID:AQK93970.1 | GO:GO:0003674 | GO:GO:0005094 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0030234 |
| GO:GO:0050790 | InterPro:IPR024792 | InterPro:Ig_E-set | PFAM:PF02115 | PANTHER:PTHR10980 | PANTHER:PTHR10980:SF20 |
| InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI | SUPFAM:SSF81296 | UniParc:UPI00084497D8 | EnsemblPlantsGene:Zm00001d010397 | EnsemblPlants:Zm00001d010397_P002 |
| EnsemblPlants:Zm00001d010397_T002 | SEG:seg | : | : | : | : |
Description
Rho GDP-dissociation inhibitor 1
Coordinates
chr8:+:112811990..112813974
Molecular Weight (calculated)
19338.4 Da
IEP (calculated)
4.611
GRAVY (calculated)
-1.067
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDTEREKEK EKEKHDCGTD VEDEEEDEEG NKRVVVLGPQ VPLKEQLELD KDDESLRRWK EQLLGQVDTE QLGDRTWSFP SRSRRTTRAM RLLSRTAAPT
101: ASASPSSSPT TSCPASSTPT LSGRLASKML DQQSLYIMPR RSQFVDDDGK CFLEMSYYFE IRKEWPGGQ
101: ASASPSSSPT TSCPASSTPT LSGRLASKML DQQSLYIMPR RSQFVDDDGK CFLEMSYYFE IRKEWPGGQ
001: MVLEDEMKKG EASGETSEKM GLSRKNSGSS LSPTEDDEED EDKKLELGPM IALKEQLERD KDDESLRRWK EQLLGVVDLE DVGETPDPVV KILDLTIRSP
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ
Arabidopsis Description
Immunoglobulin E-set superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.