Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18016 | Sorghum | cytosol | 88.68 | 87.04 |
| TraesCS3D01G414900.1 | Wheat | cytosol | 79.72 | 82.44 |
| TraesCS3B01G454500.1 | Wheat | cytosol | 78.77 | 81.46 |
| TraesCS3A01G419200.1 | Wheat | cytosol | 78.3 | 80.98 |
| Zm00001d038046_P003 | Maize | cytosol | 82.08 | 80.93 |
| Os01t0913600-01 | Rice | plasma membrane | 81.13 | 79.26 |
| HORVU3Hr1G092980.2 | Barley | cytosol | 79.72 | 68.42 |
| GSMUA_Achr10P... | Banana | cytosol | 66.98 | 62.83 |
| GSMUA_Achr10P... | Banana | cytosol | 66.04 | 57.85 |
| GSMUA_Achr11P... | Banana | cytosol | 64.62 | 54.15 |
| KRH58804 | Soybean | cytosol | 59.43 | 53.39 |
| KRH42697 | Soybean | cytosol | 58.96 | 52.52 |
| Zm00001d051687_P001 | Maize | cytosol | 56.13 | 51.29 |
| VIT_05s0062g00780.t01 | Wine grape | cytosol | 58.96 | 50.61 |
| Zm00001d017859_P002 | Maize | cytosol | 58.96 | 50.61 |
| Zm00001d010397_P002 | Maize | cytosol | 38.68 | 48.52 |
| KRG97381 | Soybean | cytosol | 53.77 | 46.53 |
| KRH31533 | Soybean | cytosol | 52.83 | 46.09 |
| PGSC0003DMT400011652 | Potato | cytosol | 40.57 | 44.33 |
| Solyc12g098650.1.1 | Tomato | cytosol | 40.57 | 43.43 |
Protein Annotations
| Gene3D:2.70.50.30 | MapMan:27.4.4 | ProteinID:AQK93971.1 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0050790 |
| InterPro:IPR024792 | InterPro:Ig_E-set | UniProt:K7VVS3 | PFAM:PF02115 | PRINTS:PR00492 | PANTHER:PTHR10980 |
| PANTHER:PTHR10980:SF20 | InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI | SUPFAM:SSF81296 | UniParc:UPI0002219E39 | EnsemblPlantsGene:Zm00001d010398 |
| EnsemblPlants:Zm00001d010398_P001 | EnsemblPlants:Zm00001d010398_T001 | SEG:seg | : | : | : |
Description
Rho GDP-dissociation inhibitor 1
Coordinates
chr8:-:112852206..112854080
Molecular Weight (calculated)
24130.9 Da
IEP (calculated)
4.188
GRAVY (calculated)
-0.748
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDQENEHEK HADAGTDVDE EEEDEDGHKR VVVLGPQVPL KEQLELDKDD ESLRRWKEQL LGQVDTEQLG ETAEPEVKVL NLTILSPGRP DLVLPIPFEA
101: DDKGYAFTLK DGSLYSFRFS FTVSNNIVSG LKYTNTVWKT GVKVENQKMM LGTFSPQQEP YVYEGEEETT PAGIFARGSY SAKLKFFDDD GKCYLETSYY
201: FEIRKEWPGP AT
101: DDKGYAFTLK DGSLYSFRFS FTVSNNIVSG LKYTNTVWKT GVKVENQKMM LGTFSPQQEP YVYEGEEETT PAGIFARGSY SAKLKFFDDD GKCYLETSYY
201: FEIRKEWPGP AT
001: MVLEDEMKKG EASGETSEKM GLSRKNSGSS LSPTEDDEED EDKKLELGPM IALKEQLERD KDDESLRRWK EQLLGVVDLE DVGETPDPVV KILDLTIRSP
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ
Arabidopsis Description
Immunoglobulin E-set superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.