Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G454500.1 | Wheat | cytosol | 88.29 | 88.29 |
| TraesCS3A01G419200.1 | Wheat | cytosol | 88.29 | 88.29 |
| Os01t0913600-01 | Rice | plasma membrane | 86.83 | 82.03 |
| EES18012 | Sorghum | cytosol | 84.39 | 79.72 |
| Zm00001d010398_P001 | Maize | cytosol | 82.44 | 79.72 |
| EES18016 | Sorghum | cytosol | 83.9 | 79.63 |
| Zm00001d038046_P003 | Maize | cytosol | 80.98 | 77.21 |
| HORVU3Hr1G092980.2 | Barley | cytosol | 88.78 | 73.68 |
| GSMUA_Achr10P... | Banana | cytosol | 66.83 | 60.62 |
| GSMUA_Achr10P... | Banana | cytosol | 70.24 | 59.5 |
| GSMUA_Achr11P... | Banana | cytosol | 65.37 | 52.96 |
| KRH42697 | Soybean | cytosol | 56.59 | 48.74 |
| KRH58804 | Soybean | cytosol | 56.1 | 48.73 |
| VIT_05s0062g00780.t01 | Wine grape | cytosol | 58.54 | 48.58 |
| KRH31533 | Soybean | cytosol | 55.61 | 46.91 |
| KRG97381 | Soybean | cytosol | 55.61 | 46.53 |
| TraesCS6D01G262900.1 | Wheat | cytosol | 57.07 | 44.83 |
| PGSC0003DMT400011652 | Potato | cytosol | 41.95 | 44.33 |
| TraesCS1D01G454500.1 | Wheat | plastid | 70.73 | 44.21 |
| Solyc12g098650.1.1 | Tomato | cytosol | 41.95 | 43.43 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G414900.1 | EnsemblPlantsGene:TraesCS3D01G414900 | Gene3D:2.70.50.30 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0030234 | InterPro:IPR024792 | InterPro:Ig_E-set |
| InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI | PANTHER:PTHR10980 | PANTHER:PTHR10980:SF20 | PFAM:PF02115 | PRINTS:PR00492 |
| SEG:seg | SUPFAM:SSF81296 | MapMan:27.4.4 | : | : | : |
Description
No Description!
Coordinates
chr3D:-:526972856..526974469
Molecular Weight (calculated)
23434.4 Da
IEP (calculated)
4.266
GRAVY (calculated)
-0.676
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHKDEHSAH PDQEVEEEED EEAKRAVVLG PQVPLKDQLE LDKDDESLRR WKEQLLGQVD TEQLGETAEP EVKVLNLTIL SPDRPDLVLP IPFVPDEKGY
101: AFALKDGSAY SFRFSFIVSN NIVSGLKYTN TVWKTGVRVE NQKMMLGTFS PQAEPYTYEG EEETTPAGMF ARGSYSAKLK FIDDDGKNYL EMSYYFEIRK
201: DWPAV
101: AFALKDGSAY SFRFSFIVSN NIVSGLKYTN TVWKTGVRVE NQKMMLGTFS PQAEPYTYEG EEETTPAGMF ARGSYSAKLK FIDDDGKNYL EMSYYFEIRK
201: DWPAV
001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
Arabidopsis Description
At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.