CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31533	Soybean	cytosol	83.27	83.95
KRH58804	Soybean	cytosol	58.37	60.59
KRH42697	Soybean	cytosol	58.78	60.5
TraesCS3D01G414900.1	Wheat	cytosol	46.53	55.61
TraesCS3B01G454500.1	Wheat	cytosol	46.53	55.61
Os01t0913600-01	Rice	plasma membrane	48.98	55.3
TraesCS3A01G419200.1	Wheat	cytosol	46.12	55.12
KRH74038	Soybean	cytosol	51.84	54.51
Zm00001d010398_P001	Maize	cytosol	46.53	53.77
KRH14075	Soybean	cytosol	49.8	53.74
EES18016	Sorghum	cytosol	47.35	53.7
GSMUA_Achr10P...	Banana	cytosol	48.98	53.1
VIT_05s0062g00780.t01	Wine grape	cytosol	53.06	52.63
Zm00001d038046_P003	Maize	cytosol	45.71	52.09
EES18012	Sorghum	cytosol	46.12	52.07
KXG22740	Sorghum	cytosol	45.31	51.39
KRH36543	Soybean	cytosol	51.02	50.4
GSMUA_Achr10P...	Banana	cytosol	48.16	48.76
KRH11529	Soybean	nucleus	50.2	48.24
HORVU3Hr1G092980.2	Barley	cytosol	48.16	47.77
GSMUA_Achr11P...	Banana	cytosol	48.98	47.43
KRH51157	Soybean	cytosol	48.16	47.39
KRH01997	Soybean	cytosol	47.35	46.59
TraesCS1A01G445800.1	Wheat	cytosol	43.67	45.92
PGSC0003DMT400011652	Potato	cytosol	36.33	45.88
Solyc12g098650.1.1	Tomato	cytosol	36.73	45.45
KRG95708	Soybean	cytosol	37.55	39.48
KRH19602	Soybean	cytosol	36.33	37.24
TraesCS1B01G480500.2	Wheat	cytosol, plastid	46.12	35.31
KRH32228	Soybean	cytosol	36.33	33.71
TraesCS1D01G454500.1	Wheat	plastid	44.49	33.23
HORVU1Hr1G095170.3	Barley	cytosol, mitochondrion, nucleus	36.73	30.93
Zm00001d010397_P002	Maize	cytosol	20.82	30.18

Protein Annotations

EntrezGene:100797593	Gene3D:2.70.50.30	MapMan:27.4.4	EMBL:ACUP02010794	EMBL:BT097533	UniProt:C6TIP5
EnsemblPlantsGene:GLYMA_18G004300	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	InterPro:IPR024792	InterPro:Ig_E-set
EnsemblPlants:KRG97381	ProteinID:KRG97381	ProteinID:KRG97381.1	PFAM:PF02115	PRINTS:PR00492	PANTHER:PTHR10980
PANTHER:PTHR10980:SF30	InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	SUPFAM:SSF81296	UniParc:UPI00019AAA01	SEG:seg

Description

hypothetical protein

Coordinates

chr18:-:350422..352588

Molecular Weight (calculated)

27710.5 Da

IEP (calculated)

4.606

GRAVY (calculated)

-0.822

Length

245 amino acids

Sequence
(BLAST)

001: MSAAVSSTTP HLEEELKNKA TNNKKKNNVG GESDQPPYND GANSDVAEET EPEEDDDSKL ESNKDLDLGP QFTLKEQLEK DKDDESLRKW KEQLLGSVDM
101: SVVGSECKDP EVKILSLIIT SPDKPDLTLP IPFTTDPKKS LFILKEGSKC QMKFTFTVSN NIVSGLKYTN VVWKTGVRVD SRKKMLGTFS PQQEPYTFEL
201: EEETIPSGMF VRGTYAARTK FVDDDRKCYL DVNYYFEIQK NRPTP

Best Arabidopsis Sequence Match ( AT1G12070.1 )
(BLAST)

001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL

Arabidopsis Description

At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.