Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G419200.1 | Wheat | cytosol | 60.94 | 69.27 |
| KXG22740 | Sorghum | cytosol | 63.52 | 68.52 |
| TraesCS1B01G480500.2 | Wheat | cytosol, plastid | 83.26 | 60.62 |
| TraesCS1D01G454500.1 | Wheat | plastid | 81.12 | 57.62 |
| GSMUA_Achr10P... | Banana | cytosol | 54.51 | 56.19 |
| GSMUA_Achr10P... | Banana | cytosol | 52.79 | 50.83 |
| HORVU1Hr1G095170.3 | Barley | cytosol, mitochondrion, nucleus | 62.23 | 49.83 |
| GSMUA_Achr11P... | Banana | cytosol | 52.79 | 48.62 |
| KRH42697 | Soybean | cytosol | 48.07 | 47.06 |
| KRH58804 | Soybean | cytosol | 47.21 | 46.61 |
| VIT_05s0062g00780.t01 | Wine grape | cytosol | 48.07 | 45.34 |
| KRG97381 | Soybean | cytosol | 45.92 | 43.67 |
| KRH31533 | Soybean | cytosol | 45.49 | 43.62 |
| PGSC0003DMT400011652 | Potato | cytosol | 34.76 | 41.75 |
| TraesCS6A01G282400.1 | Wheat | cytosol | 45.92 | 41.0 |
| Solyc12g098650.1.1 | Tomato | cytosol | 33.91 | 39.9 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G445800.1 | EnsemblPlantsGene:TraesCS1A01G445800 | Gene3D:2.70.50.30 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0030234 | InterPro:IPR024792 | InterPro:Ig_E-set |
| InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI | PANTHER:PTHR10980 | PANTHER:PTHR10980:SF20 | PFAM:PF02115 | PRINTS:PR00492 |
| SEG:seg | SUPFAM:SSF81296 | MapMan:27.4.4 | : | : | : |
Description
No Description!
Coordinates
chr1A:-:593403274..593406447
Molecular Weight (calculated)
26318.6 Da
IEP (calculated)
4.128
GRAVY (calculated)
-0.601
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQQEEEASV SVSSVPPEEE EEQDEEEEEQ EEEEEDMGAV KMALGPQVPL KDLLHLHLHK EEEGEEDDSL RRWKEQLLGP DAVHTTNLLL ALGAETVEPE
101: VAILNLTILA PGRPDLVLPI PFVPDDKGHA FMLKDGTAYS FRFSFTVSNN IVSGLNYSHT VWKTGVKVEN QKVMLGTFSP QQEPYTYKAE EDSTPSGIFA
201: RGSYSARLKF VDDDGKVYLD MRYSFEIRKD WPA
101: VAILNLTILA PGRPDLVLPI PFVPDDKGHA FMLKDGTAYS FRFSFTVSNN IVSGLNYSHT VWKTGVKVEN QKVMLGTFSP QQEPYTYKAE EDSTPSGIFA
201: RGSYSARLKF VDDDGKVYLD MRYSFEIRKD WPA
001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
Arabidopsis Description
At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.