Factsheet for TraesCS1B01G480500.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G445800.1	Wheat	cytosol	60.62	83.26
TraesCS3B01G454500.1	Wheat	cytosol	44.69	69.76
KXG22740	Sorghum	cytosol	44.38	65.74
TraesCS1D01G454500.1	Wheat	plastid	66.25	64.63
GSMUA_Achr10P...	Banana	cytosol	39.06	55.31
HORVU1Hr1G095170.3	Barley	cytosol, mitochondrion, nucleus	48.75	53.61
GSMUA_Achr10P...	Banana	cytosol	40.0	52.89
GSMUA_Achr11P...	Banana	cytosol	39.38	49.8
VIT_05s0062g00780.t01	Wine grape	cytosol	36.88	47.77
KRH42697	Soybean	cytosol	35.31	47.48
KRH58804	Soybean	cytosol	34.38	46.61
KRG97381	Soybean	cytosol	35.31	46.12
KRH31533	Soybean	cytosol	34.69	45.68
PGSC0003DMT400011652	Potato	cytosol	25.62	42.27
TraesCS6B01G310800.1	Wheat	cytosol	32.81	40.86
Solyc12g098650.1.1	Tomato	cytosol	25.0	40.4

Protein Annotations

EnsemblPlants:TraesCS1B01G480500.2	EnsemblPlantsGene:TraesCS1B01G480500	Gene3D:2.70.50.30	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0030234	InterPro:IPR024792	InterPro:Ig_E-set
InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	ncoils:Coil	PANTHER:PTHR10980	PANTHER:PTHR10980:SF20	PFAM:PF02115
PRINTS:PR00492	SEG:seg	SUPFAM:SSF81296	MapMan:27.4.4	:	:

Description

No Description!

Coordinates

chr1B:-:688236349..688240223

Molecular Weight (calculated)

35837.8 Da

IEP (calculated)

4.359

GRAVY (calculated)

-0.663

Length

320 amino acids

Sequence
(BLAST)

001: MGFPLTKVEL KSHSRNNPNP NPAAAEQKSP SPSLFLPHKS IKPSINHAAR LQVQDSILLL CRGGEGREEE AIQGGNMDQQ EEEASVSVSV SVSVPSSLHL
101: EEEEEEEEEE EEEEEQDEEE EDQQDMAPVK MALGPQVPLK DLLHLHKEEE EGEDESLRRW KEQLLGPDAV HTTNLLHALG AETVEPEVTI LNLTILAPGR
201: PDLLLPIPFV PDDKGHAFAL KDGCAYSFRF SFAVSNNIVS GLKYSHTVWK TGVKVENQKV MLGTFSPQQE PYTYKAEEDS TPSGIFARGS YSARLKFVDD
301: DGKVYLDMRY SFEIRKDWPN

Best Arabidopsis Sequence Match ( AT1G12070.1 )
(BLAST)

001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL

Arabidopsis Description

At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.